| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1293 |
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| Symbol | |
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| ID | 5081020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1456786 |
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| End bp | 1458597 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640498425 |
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| Product | peptidase M61 domain-containing protein |
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| Protein accession | YP_001182820 |
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| Protein GI | 146292396 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00192271 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACCCA ACAGATTATC AATCTTGATG CTAAGTGGAT TTTTTTCAGC CAGTGTATTT
GCTGATGTAA ACTATGAAAT TGACTTAAGC CAGCCAGAGC AGCATTTGGC ACATGTTAGG
GTCATGTTTC CTGAGACGAG TGGTCACAGT TTTACCGTTA ATCTTCCTGT GTGGCGTACG
GGGAAATATC AAGTATTACC TTTAGCCGAT GGCGTGCGCC TCTTTAGCGC TCAAGACAGT
AAAGGTAATG ATCTGCCATG GAAGCGCACG GCGAGCGGTG AATGGCAAGT TATGCTCAAA
CAACCGACAC GTGTAACGGT AACTTACCAG TTATATGCTA ATGAATTAGA TCAACGGGTT
CGTCATATTG ATGCCAGTCA TGCGTTTTTA GATGCCAGTG GTGTGTTTAT GTACAGTCCA
CAATTTAGAT CTGAACCCGT TGAAGTGCAG TTAAAAGTGC CTAAAACATG GCAAAGCTAT
TCGGGAATGG CTTCTGGTCA TTTAGCCCAT TCTTTTATTG CGCCCAATTA TGACGTGTTA
ATTGACTCTC CTATTGAAAC AGGCATCAGT ACTCATAGAA ACTTCAGTGC AGATGGGAAA
AAGTATGAGC TTGTTTTTTG GGGAGAAGGA AATTACAACG TCGATAAAAT AGTCAAGGAT
TTAACCGCAT TAAGTCGTCA AGCAAAAGCC ATTTGGGATG ATTATCCTTT TGAGCGTTAT
GTTTATATGG TACATGCTAC CAGTGGCGCA AGTGGGGCGA CTGAACATTT AAACTCCACT
ATTATTCAGC TACCCCGTTT TAGTTTTCGG GAACGTAGGG ATTATTTACG CTTTATTAGT
ACGGCATCCC ACGAATTTAT CCACACTTGG AATGTCAAAG CTTATCGCCC AGATGGACTC
GTCCCCTATG ATTACCAGCA TGAAAATATG ACGGAATTAT TATGGATGGC CGAGGGTTCA
ACTAGCTATT TCCAAGGACA GTTACTCCTT CGGGCAGGTG TGATGACACC AAAAGAGTTT
CTCGACGATT TAGCCAAACG TATTGAAAAA AACCAACTTA ATCCAGGGCG AGAAACTCAA
TCTGTCGCCG AGGCCAGTGC AGGGCAATGG GCTAGTACGG GTGGCGATTA TGCGATTAAT
CACAGTGTGA ATATTTACTC CGAGGGCTAC TTAACCTCTT TAGCCTTAGA CTTCTCACTT
CTCGAAGACT CTAAACTGAA GCATTCTTAC CGTGATGTGC ACCGTCGTTT ATATCAAAAT
CATCGGGTGC CGAAGGGATA TACGATCAAT GATGTGCAGC AAATTCTAAA AGATTTATCA
GGTAAAGATT ACACTCCTTG GTGGCACGCT AATGTGAATC GTCCTATAAG CCTAGATTAC
CCAGATCTGT TAGCACAGGC TGGTTTGGTT ATGTCCTATG GAAAGGATTC CAAAGCTGAG
GCATTTGCGG GCATGACCTT AAGCAGTAAA TATGGATCTT TGGTATTAGA TCAAGTATTG
CGTAATGGTC CCGCATGGCA AGCGGGCATT GTAGCGGGTG ATGAAGTCCT CGCGATTAAT
GGTCTTAAGG TAACAGCTAC AGGCTTTAAT AAACGGATAA AAGATTTTAA TGCTGGCGAT
AGCATTGAAG TAACCTTATT TAGCAACGAT AAAATCAAGC AAGTGACTCT GAAACTGGGT
GAGCAACAAA GTGGTATGCT GATGTTAAAG GGCAATGCTA ATGCAACTAA GCAGCAAAAG
GCGTTCTTTA AGGCATGGTT GGGTATTGAG TGGCCTTTTG ATAATCGAGG CGAATTAGCG
GTTAAAATCT AA
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| Protein sequence | MKPNRLSILM LSGFFSASVF ADVNYEIDLS QPEQHLAHVR VMFPETSGHS FTVNLPVWRT
GKYQVLPLAD GVRLFSAQDS KGNDLPWKRT ASGEWQVMLK QPTRVTVTYQ LYANELDQRV
RHIDASHAFL DASGVFMYSP QFRSEPVEVQ LKVPKTWQSY SGMASGHLAH SFIAPNYDVL
IDSPIETGIS THRNFSADGK KYELVFWGEG NYNVDKIVKD LTALSRQAKA IWDDYPFERY
VYMVHATSGA SGATEHLNST IIQLPRFSFR ERRDYLRFIS TASHEFIHTW NVKAYRPDGL
VPYDYQHENM TELLWMAEGS TSYFQGQLLL RAGVMTPKEF LDDLAKRIEK NQLNPGRETQ
SVAEASAGQW ASTGGDYAIN HSVNIYSEGY LTSLALDFSL LEDSKLKHSY RDVHRRLYQN
HRVPKGYTIN DVQQILKDLS GKDYTPWWHA NVNRPISLDY PDLLAQAGLV MSYGKDSKAE
AFAGMTLSSK YGSLVLDQVL RNGPAWQAGI VAGDEVLAIN GLKVTATGFN KRIKDFNAGD
SIEVTLFSND KIKQVTLKLG EQQSGMLMLK GNANATKQQK AFFKAWLGIE WPFDNRGELA
VKI
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