| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1291 |
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| Symbol | |
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| ID | 5081018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1452751 |
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| End bp | 1454307 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640498423 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001182818 |
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| Protein GI | 146292394 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGATT CAAACGCAAC CGTTTCACAA CTTGCATTAT TACAACAAAA ACTTCACTCG
GCCAAACTCG CCTTAGATGA AGTCAATGAA GATAGAAATG CCAAGTTACA AACACTACTC
CAATTTATTG GCCATTTAAG CCTAGCCTGT AAAGGGCAAA ACCTTGAACT GGATAATAAG
CTCGCTAAAC TTCGCCATAA CTTAAGTACG TTTGAGCGGA TCGATGAGGC ATTACCAGAA
TTAGTGGATG TTGAACGCCT ATTAAAAGGC CAATATCACC ATGTGATGGT ACAACTCGAA
GAAAGTCGAG CGGGATTAGC CCAAGTGGTT CGTCAGATCC AACGCGTTAA CTCTGCACCC
GAAAAACTCA AAAAAGAAGT TAACTATTTC AAGCAGGATC TTTCCAAACC TTTCCATACA
GTTTGGGAAT ATATTCCTAA AGTTAAACAA ATTATTGGCT TTTACGAAAC CATATTACAG
CAGCAATTTA GCGAATCAGA AAAGCTTGAA ATTCTACCTA AGCACAGACA ACTTGCCCAT
GAACTAGCCC ATATGATTTC GGAAATTGAA TTCCGTAAAG ATCAACGTGA TCAAGTGTTA
GTCATAAAGG AAATGCTAGC CTCCGATATA GAAATCGATA ATTTACTCGA AGCTTATCAA
ACCATTTTAT CTTTATTGCT TGATAACATC GCACGGGAAA AGTCGGCATC CCAAGAATTT
TTATACGCCT TAAATGATGC CCTAGCCGCG GTACGGGAAG TGGTCAGTGA ATCCTACAAC
CACACCCAAC GCAGTTTTCA GCTAAAAACA CAGTTAAACA GAGAGATCAA TACTCGGGTT
GATAACGCAG GAGCAATCAT ATTAGATGTT GAAGATGTGG TTGATCTTAA AGCAAAGCTT
ACCGAACAGT TAAACTCGAT CCGCTCGGCA TTAGCCCGTA AAGAAGCCTT GGAACAGAGG
GAACAAGCAC TGTTGCGTAA ATCCATGGAA ACAATGCGCA AAGAACTCAA TGAACTCAGT
ACCGAAGCAA ATACCTATAA AGAACGGTTA TTCGAGCAAC AAAAACTCAA TTTATTAGAT
AGCTTAACGC AATTACCTAA TCGCGCAGCC TTAGAAGAAC GCATGGAGTT GGAATACCGT
AACTATCAAC GTCATAAGAG CCCATTGTGG GTGGCGGTTG CCGATATTGA TCATTTTAAA
ACCATTAATG ACAGTTTTGG CCACAGTACT GGTGATAAAA CATTGCAGGT GATTGCGATG
GCACTTAAGA ACTCCCTACG AGATACAGAA TTTGTTGCAC GCTACGGCGG TGAAGAATTT
GTCCTCTTAC TACCCGATGT TGGTAACGGT GATATTGTTC AACTTTTAAA CAGAGTGCGT
GAAAAAGTAA AAAACATTCC ATTTAAATTT AAAAATCAGA GAATTACAGT TACAGTATCT
ATAGGGGCTG CACAAGTTAT GGGGAATGAA CTCATACATG AGACCTTCGA ACGCGCCGAT
GCAGCACTCT ATAAAGCAAA ACATGAAAGC AGAGACAGGG TTGTGATTGA CGTATAG
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| Protein sequence | MKDSNATVSQ LALLQQKLHS AKLALDEVNE DRNAKLQTLL QFIGHLSLAC KGQNLELDNK
LAKLRHNLST FERIDEALPE LVDVERLLKG QYHHVMVQLE ESRAGLAQVV RQIQRVNSAP
EKLKKEVNYF KQDLSKPFHT VWEYIPKVKQ IIGFYETILQ QQFSESEKLE ILPKHRQLAH
ELAHMISEIE FRKDQRDQVL VIKEMLASDI EIDNLLEAYQ TILSLLLDNI AREKSASQEF
LYALNDALAA VREVVSESYN HTQRSFQLKT QLNREINTRV DNAGAIILDV EDVVDLKAKL
TEQLNSIRSA LARKEALEQR EQALLRKSME TMRKELNELS TEANTYKERL FEQQKLNLLD
SLTQLPNRAA LEERMELEYR NYQRHKSPLW VAVADIDHFK TINDSFGHST GDKTLQVIAM
ALKNSLRDTE FVARYGGEEF VLLLPDVGNG DIVQLLNRVR EKVKNIPFKF KNQRITVTVS
IGAAQVMGNE LIHETFERAD AALYKAKHES RDRVVIDV
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