Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1287 |
Symbol | |
ID | 5081014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1447086 |
End bp | 1449911 |
Gene Length | 2826 bp |
Protein Length | 941 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640498419 |
Product | peptidase S9 prolyl oligopeptidase |
Protein accession | YP_001182814 |
Protein GI | 146292390 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000172415 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAAGTTAC TCCCTATCAC ATCTCTGGTT CTGTTATCCC TCGGGGCATT ATCTGCGGTG CAGGCCGAAA CCCGTACTAA GCCGCTCACT TTAACGGACA TCATGCATTT TGAATCTCTC GGCAAGCCTG TGATTGCCGA TAATGGTCGA GTATTTGCGG TGGAGTCAGC TCCTGATCGG GGCGATAGCC ATACGATAAT AAAAAATGTA CACACTGGCC AAGACTATAA TATCGCGGGT GGTTCAGAAC CTATGATTAG CCACAATGGT CGTTATGTGG CTATGGTGGT GAAACCTAGT TTACTTACCG TTGAAACCTC TGATGCAAAG ATAAAGAAGC AACTCAAGGC TGACATGGTA TTGCTCGATA CTCAAACGGG CACACTGACT CGCTTCGAAC GCGTGAAGGA ATTTGCGTTT AGTCATGCGG GTAACCATCT CGCAATTTGG TTTGAGGCTG ATGAGGAAAC GCCAAAAGAT CCCAAAGAGG CTATTGAAAC CGCAGAAATA TTAACGGGAG GCCCTGTTAA GGCCGAAAAG TCCAAAGTGG ATAAGTTTGA TCAAGGCCGA CGTTTTAGTT TGATCAATTT AGAAAACCAA GCACAACGAA TTGATGCAGA GCATGTTACG GCCTATGTTC TTGATAAAGA TAGCCGCAGA CTTGCACTGG CAATCAATGA TATCGCTAAT CAGCGACATC AATTGCGATT AGTGGATTTA ACCTCCCAGC AGCAATCTAC GGTTTTTGAA TCGAATAGTC AGCAGATTGG TGCTTTGGCA TTGGCAAAAA ATGGTCGTTG GCTTGCATTT ACGCAGGGCA AAGACAGCGA GTTACCTTAT GGCCGCAGCT ATCAGTTATC GCTGGTTGAT CTGCAGTCGG GCAAACTCAG TAAAGTCCCT GATTCATCCG AGTGGAAACT CAATCGCTAC ACTAGTTTAA GCTTCTCATT AGACAGTGAG CGACTCTTTT TCGGCCGTGT CCCTGAGGTT AGTCAGCAGC TAAGCCTGAA GAAAATTACC GAAGAAAAGG ATCTGTACGA TAAAGAAATT GTCACAGGTC TGCGTGGGCT TAAGGTGTGG CATGGTGATG ACCCGCGAAT TAAACCTAAT GAAATCAAAC AATATGAGAA AGAACAACAA CGTACTTATC TTGCCGTTTT ACATTTAGGC TCGAATAATG TGGTACAGCT TGGCGATCAA ACTGTTCCCG ATGTGACGAT TTCACAACAT AAACGCTTTA TGTTGGCGAG TTCAGATTTA CCCTATCGTA AGATGACAAC CTGGGCTGGC TTCTATCAAG ATTACTATCT TGTTGATATT AATACTGGTC GTAAGGTGTT ATTTCTAACG CAGCAGCCAA GTGATGCAGA GCCAACACTC TCAGGGAAGG GTAAATATGT GGCTTATTAT CAGCAGGGTC ACGTTTATCT TTATGATATT GCAGAGGGGC GTCGCACTAA TCTGACTCAA TCTTTAAAGG TTAGTTTTGC CGATGAAGAT CATGACTATC CTTCTAGTGC GCCGGGATAT GGTTTTGGCC CTTGGCTAAA AGATGATGCG GGCTTTTTAG TTTATGACAA ATACGATATC TGGCAGTTTA ATACTGAATC TAAAGCGGGT TTTGTGTTAA CCGCGGGGCA AGGGCGCACA CAAAAAATCC AATATCGGAT CGAAGGTTTA GTGGATAATC CCGATGAGCC GACCGAGCTT TCACATAATG CGACTGTATT ACTTCATGGT TACAGCGATA AAACTAAAGC CGATGGGTTC TATCAAGCAA CGCTTGGCAC CTCTGGTGTT AACACATTGA TGCAAGGTGA GTATAAACTC AGTGTCTTGG GGCGCAGTAA AGACGCCGAT ACGCTCCTTT TTTCAAAGGA GCGTTTTGAT TTATTCCCCG ATTTATATAC TGCGAGCTAT AACGCACCAC AAAATGCAGT GAAACAAACC GAGTTAGATA AACAGCGGCA AGCCTTTAAT TGGAGTCAAT CCGAGTTAGT CCACTGGACT AATGGTGATG GTAAACCATT AGATGGTGTA TTAATAAAGC CGACCCATTA TCAACAAGGT AAGCGCTATC CAGTACTGGT TTATTACTAC CAAGTGATGA CGGATAGATT GCATGCATTT CCATCGATGC ACATCAACCA TAGGCCCAAT TTTGCTTGGT ATGCCGATAA TGGTTATGCC ATCTTCTTAC CGGATATTCG GTTTGATATT GGTTATCCTG GCGCAAGTTC AGTACAAGCA CTTACTTCTG GCGTTCAAAA GTTAATCGAT ATCGGGATTG CCGATCCCAA TGCCATCGGT TTGCAAGGTC ATTCATGGAG TGGTTATCAA ACGGCATTTG CTATTACTCA AACTAAGATG TTTAAGGCTG CTGTAGCGGG AGCACCTGTT GCTAATATGA TCAGTGGATA TAGCGGTATT CGCCACGGTA CAGGGCTTGC GCGCCAGTTC CAGTATGAAA CTGGGCAGAG TCGTATTGGT GCCAGTTTGT TTGCTGCACC ACAAAAATAC ATTGAAAACT CACCAGTATT TTATGCTGAT CGTATTCAAA CGCCTTTAAT GATTATGTTT GGCGATAAGG ATGATGCAGT ACCTTGGGAG CAAGGTATTG AAATGTATTT AGCGATGCGT CGTGCGGGTA AAGAGGTGGT GTTTTTGCAA TATGAAGATG AACCGCATCA TTTGAAAAAA TATCCAAACA AGCTCGATTA CAGTATTCGC ATGATGGAAT ATTTCGACCA TTATTTGAAG GGTAAACCTG CACCAGAATG GCTCAGTAAA GGTGAAGCCT ATATAGAATA TCAGACTGGT GAATAA
|
Protein sequence | MKLLPITSLV LLSLGALSAV QAETRTKPLT LTDIMHFESL GKPVIADNGR VFAVESAPDR GDSHTIIKNV HTGQDYNIAG GSEPMISHNG RYVAMVVKPS LLTVETSDAK IKKQLKADMV LLDTQTGTLT RFERVKEFAF SHAGNHLAIW FEADEETPKD PKEAIETAEI LTGGPVKAEK SKVDKFDQGR RFSLINLENQ AQRIDAEHVT AYVLDKDSRR LALAINDIAN QRHQLRLVDL TSQQQSTVFE SNSQQIGALA LAKNGRWLAF TQGKDSELPY GRSYQLSLVD LQSGKLSKVP DSSEWKLNRY TSLSFSLDSE RLFFGRVPEV SQQLSLKKIT EEKDLYDKEI VTGLRGLKVW HGDDPRIKPN EIKQYEKEQQ RTYLAVLHLG SNNVVQLGDQ TVPDVTISQH KRFMLASSDL PYRKMTTWAG FYQDYYLVDI NTGRKVLFLT QQPSDAEPTL SGKGKYVAYY QQGHVYLYDI AEGRRTNLTQ SLKVSFADED HDYPSSAPGY GFGPWLKDDA GFLVYDKYDI WQFNTESKAG FVLTAGQGRT QKIQYRIEGL VDNPDEPTEL SHNATVLLHG YSDKTKADGF YQATLGTSGV NTLMQGEYKL SVLGRSKDAD TLLFSKERFD LFPDLYTASY NAPQNAVKQT ELDKQRQAFN WSQSELVHWT NGDGKPLDGV LIKPTHYQQG KRYPVLVYYY QVMTDRLHAF PSMHINHRPN FAWYADNGYA IFLPDIRFDI GYPGASSVQA LTSGVQKLID IGIADPNAIG LQGHSWSGYQ TAFAITQTKM FKAAVAGAPV ANMISGYSGI RHGTGLARQF QYETGQSRIG ASLFAAPQKY IENSPVFYAD RIQTPLMIMF GDKDDAVPWE QGIEMYLAMR RAGKEVVFLQ YEDEPHHLKK YPNKLDYSIR MMEYFDHYLK GKPAPEWLSK GEAYIEYQTG E
|
| |