Gene Sputcn32_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1283 
Symbol 
ID5081010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1443365 
End bp1444039 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content49% 
IMG OID640498415 
Producthypothetical protein 
Protein accessionYP_001182810 
Protein GI146292386 
COG category[R] General function prediction only 
COG ID[COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0971816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTTGTT GCCCGGATAA GCCGAGTTAT GTATTGGAAG GGGAGCCTGC GAGTACTTTG 
ATTTTATTGG CCCACGGTGC GGGTGCTAAC ATGGATTCTG ATTTTATGCA GGCCATGTCG 
GCGGGATTAG CTGCTCAGGG CTTTCGAGTG ATGCGCTTTA ACTTTCCTTA TATGCAGGCG 
AATGCTGTAG ATGGCAAACG GCGTCCACCG GACCGTGCGC CTAAATTGCT CGCGTGTTTT 
ACACAGATGC TCGATATCGC CCACTCACAA CCACAAGTTG AACGTGTAGT GTTAATGGGG 
AAATCCATGG GCGGGCGTAT GGCGGCCCTA TTAGCCTGCG ATCCTGCATT AGCGGCGCGC 
ATCGATAGGG TGATTTGTTT AGGTTATCCT TTTGTGCCAC TCAAAGGCGG CGAGCCTAGA 
TTGGAACCTT TGAATGAATG CCAAGTCCCA GTATTAGTCG TACAGGGTGA GCGGGATAAG 
TTTGGTGGCA AAGCGCAGAT ACCAAGCTGG CCCTTGAAAG CTGAGATAGG ATTGGCTTGG 
ATAACCGACG GCGATCATAG TTTTGTCCCA AGAAAGTCGT CATGTGCTAG TGAAGCCGCT 
AACCTTGCAC GTGCTATTGA TTTATCAAGT GAATTTATTC GTGAGCTTAA TGTTGAGCGA 
ATAAATGTTG AATGA
 
Protein sequence
MSCCPDKPSY VLEGEPASTL ILLAHGAGAN MDSDFMQAMS AGLAAQGFRV MRFNFPYMQA 
NAVDGKRRPP DRAPKLLACF TQMLDIAHSQ PQVERVVLMG KSMGGRMAAL LACDPALAAR 
IDRVICLGYP FVPLKGGEPR LEPLNECQVP VLVVQGERDK FGGKAQIPSW PLKAEIGLAW 
ITDGDHSFVP RKSSCASEAA NLARAIDLSS EFIRELNVER INVE