| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1272 |
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| Symbol | |
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| ID | 5080999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1431086 |
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| End bp | 1432729 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640498404 |
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| Product | L-lactate permease |
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| Protein accession | YP_001182799 |
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| Protein GI | 146292375 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1620] L-lactate permease |
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| TIGRFAM ID | [TIGR00795] L-lactate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0565099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATAC TTCAACTCCT CGCTAGCTTG ACGCCAGTGC TCAGTGTAAT GCTCTTTTTG
GTATTACTCA GAATGCCAGC ATCTAAGGCT ATGCCCATCT CTATGGTAGT CACAGCGCTC
GCCGCCGTGT TTATTTGGCA GATGGATACC ACATTACTGG CAGCATCAGT CCTAGAGGGA
CTGTTATCAG CCATTACACC ATTAACCATC ATTTTTGGTG CCGTGTTCCT ACTCAATACC
CTGAAATACT CAGGTGCCAT GGACACAATC CGCGCAGGCT TTACTAACAT CAGTGCCGAT
GCCCGTGTGC AGGTCATTAT CATCTGTTGG TTATTTGGAG CCTTTATTGA GGGTAGTGCA
GGTTTTGGTA CTCCCGCAGC GATTGGCGCA CCACTATTGG TATTGCTGGG TGTACCACCC
GTTGCCGCAG CCGTTGTGGC TTTGATTGCT GACTCAGCCT GCGTATCCTT CGGTGCGATT
GGTCTACCCG TACTCTTTGG GATGGAACAG GGTCTGATCC AAGGTGGTGT AAGCATGGCT
GCTGAGCAGT TTGCTGCCCA TGGCGGTACC TATGCCGGTT ACGCTCGATA TATCGTCATG
CATATGATCA CTATCGACTT AATCACGGGT TCATTAATTC CGCTGGTTAT GGTGACTATG
CTGACAGGAT TTTTTGGCCG CAATAAATCC TTTAAAGAAG GCTTAGCAAT TTGGAAATTT
GCCCTTTTTG CGGGTCTTGC CTTTACCGTC CCCGCATGGA TCATCAACTA CCTTGCAGGC
CCAGAATTCC CTGCCGTTAT CGGTGCATTG ATCGGTATGG CTTTAGTGAT CCCAGTAGCA
CGTAAAGGCT ACTTACTCCC TAAAACACCT TGGAATGATT TTGCAGAGAA TGACAACCAA
GAAGGTGTGA AAATAGACGC GAAAGCCAAG TTTTCACAAA TTGCCGCTTG GACACCGTAT
ATCATCATGG CCGCGCTGTT GGTGTTATCT CGTACAGTTA TGCCGCTTAA AGCATGGTTA
TCAAGCTTTA ACATTAGCTG GACAGGCCTA ATGGGCACTG AGCTTAAAGC GAGCTTCGCG
ACGCTATATG CACCAGGTGC CTTCTTTGTT GCAGTGTGTA TTCTCGGTTT CTTCCTGTTC
AAAATGAAAA GCCCAGCGAT TAAGCAAACT GTCGGTGTTT CATGTAAGTC CATGTTGCCA
ACTATTATTT CACTAGGTGC GTCAGTGCCT ATGGTGAAGA TCTTCTTAAA CTCAGGCGCT
AATGGTGCAG GCCTTGCCTC AATGCCTGTC GCTTTAGCGG ATATGTTGGC TGGCTCCATG
GGCGCGGTAT GGGCATGGAT GGCACCTATT GTGGGGATTT TTGGTGCCTT CCTATCAGGT
TCAGCCACTT TCTCGAACAT GATGTTCTCC AGTCTGCAAT ACAGTGTGGC CGACAATGTT
GGCATGAACC ACACACTGGT ATTGGCACTG CAAGGTATCG GTGCAAACGC CGGTAACATG
ATGTGCGTAA TGAACGTGGT CGCCGCAGCA ACGGTCGTGG GTATGGCAGG TAGAGAATCA
GAAATTATTC GTAAAACAAT GCCTGTTGCC ATTGGTTATG CCTTACTGGC AGGCACGATA
GCTACCCTAT GGGGTGGATT CTAA
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| Protein sequence | MTILQLLASL TPVLSVMLFL VLLRMPASKA MPISMVVTAL AAVFIWQMDT TLLAASVLEG
LLSAITPLTI IFGAVFLLNT LKYSGAMDTI RAGFTNISAD ARVQVIIICW LFGAFIEGSA
GFGTPAAIGA PLLVLLGVPP VAAAVVALIA DSACVSFGAI GLPVLFGMEQ GLIQGGVSMA
AEQFAAHGGT YAGYARYIVM HMITIDLITG SLIPLVMVTM LTGFFGRNKS FKEGLAIWKF
ALFAGLAFTV PAWIINYLAG PEFPAVIGAL IGMALVIPVA RKGYLLPKTP WNDFAENDNQ
EGVKIDAKAK FSQIAAWTPY IIMAALLVLS RTVMPLKAWL SSFNISWTGL MGTELKASFA
TLYAPGAFFV AVCILGFFLF KMKSPAIKQT VGVSCKSMLP TIISLGASVP MVKIFLNSGA
NGAGLASMPV ALADMLAGSM GAVWAWMAPI VGIFGAFLSG SATFSNMMFS SLQYSVADNV
GMNHTLVLAL QGIGANAGNM MCVMNVVAAA TVVGMAGRES EIIRKTMPVA IGYALLAGTI
ATLWGGF
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