| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1258 |
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| Symbol | |
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| ID | 5080985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1412801 |
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| End bp | 1414342 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498390 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001182785 |
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| Protein GI | 146292361 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAA ATAGCCCAAA TGCAGAGAAC GATCTGCGTG AAGTCAAACA GCTGGGAATG
TGGGCTTCCA TCACGAGTTT AAGTTATATT TTTTGGCTCG TTGGGGGGAT GGAACTGGTT
GAGCGAATCG CCTATTACGG CGTAAAAGCC AGTGCGGGCC TCTACGCAAA AGCACCAGAA
TCGGCAGGAG GATTAGGGAT TAGCCTAAGC GACTACGGCA TTATTATTTC CCTCTGGGCC
ATTATGCAGA CCTTTGTACC TGTATTTACA GGGGGCGTTT CCGACCGCGT TGGTTACAAA
GAAACCATCT TTGGCTCCAC CATCATTAAA ATCTTTGGCT ATTTAGTTAT GGCATTTTTC
CCCAGCTTTT GGGGGTTCCT CGTTGGTGCA TTACTGCTCG CGATAGGCAC CGGGATATTT
AAACCCGGCA TTCAAGGCAC CTTAGTACTC AGTACCCAGC GTAACAATAC CTCTATGGCT
TGGGGGATTT TTTACCAAAT AGTTAACATT GGTGGTTTCC TCGGGCCCTT GGTTGCCGTA
CATATGCGTC AACTGTCATG GGACAATGTC TTTTTTGCCT GTGCCGCCAT TATCTCGCTC
AATTTTTTAT TTTTACTTAC TTATACAGAA CCAGGTAAAG CAGAGCGACT AGAGCGCAAT
AAACACATTA AATCAGGGGA AATTAAGCAA GAAGCGCTCT GGCGCGATGC TTGGCGAGAG
CTAAAAAAAC CAATTGTGAT CTACTACATG CTGGTATTTT CTGGTTTTTG GTTCCTATTC
AACGCGCTAT TTGATGTACT GCCTATCCAT ATTTCCGAAT GGGTTGATAC CAGTGTAATA
GTAACCTCCT TGTTTGGAAC CGAAGGCACC CGCAACGGTA TTCTGCAATT CTGGCTTGGC
CTTAATAACG AAGGTACTAA GGTCATGCCT GAAGGCATGC TTAACCTCAA TGCGGGTTTG
ATTATGACCT GCTGCTTTAT TGTCGCCGCG CTGACTGCGA AATATCGGAT CACCACAGCA
ATGTTTGCAG GCTGTTTACT GAGTATTTTA GCCTTTGTGT TTATTGGCGC TTTCCATGCC
GCGTGGTTTA TCGTACTTGC CATTGCCATG TTTTCCATTG GCGAGATGAT GATAAGCCCG
AAGAAAAACG AGTTTATGGG GAATATTGCC CCCGAAGGTA AAAAAGCCAT GTACTTGGGA
TTTGTGATGT TACCCCAAGG AATTGGCTGG GGATTAGAAG GCTATTTTGG CCCTAAACTC
TATGAGATTT ATGCATCAAA GGAGCTATTT TCACGGGATT TATTGCTAGA ACGCGGCATG
AACAGCGCAG AGGTCAGTGC CATTCCACAG GGTGAAGCCT TTACCACTTT GGTGAGCTAC
ACAGGTGAAA ATGCACACGA TCTTACCCAA CTGTTGTACC ACAGCCACAA TATTGGCATG
GCATGGTACA TCATCGCCGC CATTGGGACT ATCTCGGCGG TGGGCATTTA TATCTATGGT
AAGTGGTTAC TTACTCTGCA AAAATCCCAA CAGTACGCCT AA
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| Protein sequence | MSQNSPNAEN DLREVKQLGM WASITSLSYI FWLVGGMELV ERIAYYGVKA SAGLYAKAPE
SAGGLGISLS DYGIIISLWA IMQTFVPVFT GGVSDRVGYK ETIFGSTIIK IFGYLVMAFF
PSFWGFLVGA LLLAIGTGIF KPGIQGTLVL STQRNNTSMA WGIFYQIVNI GGFLGPLVAV
HMRQLSWDNV FFACAAIISL NFLFLLTYTE PGKAERLERN KHIKSGEIKQ EALWRDAWRE
LKKPIVIYYM LVFSGFWFLF NALFDVLPIH ISEWVDTSVI VTSLFGTEGT RNGILQFWLG
LNNEGTKVMP EGMLNLNAGL IMTCCFIVAA LTAKYRITTA MFAGCLLSIL AFVFIGAFHA
AWFIVLAIAM FSIGEMMISP KKNEFMGNIA PEGKKAMYLG FVMLPQGIGW GLEGYFGPKL
YEIYASKELF SRDLLLERGM NSAEVSAIPQ GEAFTTLVSY TGENAHDLTQ LLYHSHNIGM
AWYIIAAIGT ISAVGIYIYG KWLLTLQKSQ QYA
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