| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1254 |
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| Symbol | |
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| ID | 5080981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1408419 |
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| End bp | 1409864 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640498386 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001182781 |
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| Protein GI | 146292357 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTG AAACACTCGG TCTATCTTCT CCTATTTTGA ATGCGATAAC TGAGTGTGGC
TATCAGCAAC TCACTCAAGT ACAAGAGAAA GTGATCCCAC TAGCCTTTGA AGGCAAAGAT
ATTATGGCCT GCGCCCAAAC GGGTACGGGG AAGACGGCAG CCTTTGCTCT GCCCGTACTT
GAAAAGTTGG CGGCTGAGAT TTTAGTTAAT GATGACAACG ACAAACCGAT TTTACGCGCC
TTGGTGATGA CCCCCACCCG CGAACTGGCT ATTCAAGTTT GTGACAATAT CCAGAAATAC
AGCCAATTCC TGCCACTGAA AACAATCGCA GTTTACGGCG GCGCCAATAT GAATCCCCAG
CGTAAAGGGG TGGAGCAGGG CGTTGATATC CTCGTGGCGA CACCGGGTCG ACTCTTCGAC
ATTATCGGCC AATTCCAGTT AGATTTGTCG AGTGTGACAA CCTTAGTGAT CGATGAAGCC
GATCGCATGT TAGATATGGG ATTTGTACGC GATATTGAAA AAGTGAAACG CTTAATCGCG
CCCGTGCACC AAACCATGCT GTTCTCGGCC ACATACAGTG ATGCAGTCAA ACAGCTTGCA
CAAAAGATGC TAAATGAGCC TCAGTGGGTG AATGTTGCCG ACACGACGAC CGCATCTACC
GTTGTTCAAG AAGTGTATCG GGTTGATAAG CGCCGTAAAG CCGAGTTGTT GTCAGAACTC
GTTGGCCGTA ACAATTGGCG CCAAGTCCTC GTGTTTGCAA GCACTAAGGA AAGCGCCGAG
CATTTATTAC AAGAATTAAA GCTTGATGGC ATAGCCGCTG GTGTATTCCA CGGTGATAAA
ACCCAAGGCG CCCGTAATAG GGTATTGGAA GACTTTAAGC TAGGTAAGTT GCGTGTATTG
GTTGCGACCG ATGTTGCCGC CCGCGGCTTA GATATTCAAG CACTACCTTT GGTTATCAAC
TTAGAGTTGC CATTTTTTGC CGAAGATTAT ATCCACCGCA TTGGCCGAAC AGGGCGTGCG
GGATTAGCGG GGCGTGCGAT TTCGTTTGTT TCGCCCTCTG ATGATGAGAT GCTGGCTGAA
ATTGAAGCTT TAATTGAGCA GAAACTGCCA GTGTCAGTGC AGTCCGGTTA TGAGGAAGGT
ACACCGCTGC CCGCTCGTTA TCGTGATATT CCCGCATCGC CGACCAAACC CGCTAAATGG
AGTTATAAAG CGCCAAAGGA TCGTGCTATC GGTAAATCCA GCGAAAGCCA AGCTCGTTCT
CGTCAGAACA TCGGACGCGA TGCGATGCGA GAAAGCCCGA CTCGTGAGGG AAAGTATGCG
AAAGATAAGG CGCATGGTGC AGAAGGAAAA GGATCTGCGG GCAAACCTTT TAATACGACT
AAACCAAAAC CACACTCAGG GAGTCGTTCT GGGTTTGGCG TATCTCGCGA TAAGAAAAAC
GGCTAG
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| Protein sequence | MKFETLGLSS PILNAITECG YQQLTQVQEK VIPLAFEGKD IMACAQTGTG KTAAFALPVL
EKLAAEILVN DDNDKPILRA LVMTPTRELA IQVCDNIQKY SQFLPLKTIA VYGGANMNPQ
RKGVEQGVDI LVATPGRLFD IIGQFQLDLS SVTTLVIDEA DRMLDMGFVR DIEKVKRLIA
PVHQTMLFSA TYSDAVKQLA QKMLNEPQWV NVADTTTAST VVQEVYRVDK RRKAELLSEL
VGRNNWRQVL VFASTKESAE HLLQELKLDG IAAGVFHGDK TQGARNRVLE DFKLGKLRVL
VATDVAARGL DIQALPLVIN LELPFFAEDY IHRIGRTGRA GLAGRAISFV SPSDDEMLAE
IEALIEQKLP VSVQSGYEEG TPLPARYRDI PASPTKPAKW SYKAPKDRAI GKSSESQARS
RQNIGRDAMR ESPTREGKYA KDKAHGAEGK GSAGKPFNTT KPKPHSGSRS GFGVSRDKKN
G
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