| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1250 |
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| Symbol | |
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| ID | 5081562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1399614 |
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| End bp | 1402142 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640498382 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_001182777 |
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| Protein GI | 146292353 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATA ACAGTGAATT GAGCCAAAAC ATCAGCGAAG CCAAAGCGCC AAAGCGTGCC
ACAAAGGCGA TGACGACTAA GGCATCGGGA GGGAAAACTA AATCCACTGC AGTGCCCTGT
GAGCCCTGCG ATGCACTGCC GGCCTCCTTT GAACGCCACG TCCGTTATGG CTTAAGCCGT
GGTCAAGGCG TGAGTTGTGA GTTGTTTCAA GCACTAGCGA TTAGTGTTAA GGAGCAAATG
CTCGATAACT GGCGCCAAAC CAGATTGAAT GACAGTCGTT TTGAGCGTAA GCAAGTGGTT
TATTTATCAC TGGAATTTTT AATGGGTAGG GCGTTAGGGA ATGCGTTATT AAGCCTTGAT
TTACAAGATG AAAGCAGAGA TGCGCTTAGC AAGTATGCTG TCACACTTGA GGAGTTGGAA
GAAGCCGAGC ATGACGCAGG TTTAGGTAAT GGTGGCTTAG GTCGACTTGC CGCATGTTTT
CTTGATAGTT GTGCCAGCAT GGACTTGTCC GTAACGGGTT ACGGCATTCG TTATGAATAT
GGCATGTTTG CCCAAAAAAT TGTTGATGGG TATCAGGTTG AGCGCCCAGA TCGCTGGCTA
CGTGAGGGTA ACCCGTGGGA GGTGCGAGTA CCCAACCACA ATGTTATCGT GCCTTTTTTT
GGTCACACCG AATCCTATGT TGATAAGCAA GGACGCAGGC ATATGATTTG GGTCGACACC
CAAGATGTAC TTGCCGTTGC CTATGATATG CCCGTGCCGG GTTACCGTAA TGGTCGCGTT
AATACCCTGA GGTTATGGAA GGCCGAAGCG ACCGATGACT TTGATTTAGC TGAATTTAAT
CAAGGTGATT ATACCGAGGC CGTGGCCCGT AAAAACTTGG CAGAACAGAT CACTATGGTG
CTCTATCCCA ATGACGCAAG CGAAAACGGC AAAGAACTGC GATTACGTCA GCAATACTTT
TTATCCTCCG CCAGTTTGCA GGATTTGCTT AAGCGCTGGG TTCATCACCA TGGTAATGAC
TTTAGTGATT TTGCGGCCAA AAACGTGATC CAGTTGAACG ATACCCATCC AAGCATTGCC
GTCCCAGAGT TAATGCGTTT GCTGGTGGAT GACTATGGAT TGGAGTGGGA GGCTGCTTGG
TCTATTACGA CACACACTAT GGCGTATACA AACCACACTT TGTTACCCGA GGCATTAGAG
CGGTGGCCTG TGCGAATGAT GGCATTAATG TTGCCGCGCA TTTTGGAAAT TATTTATGAA
ATCAATGCTC GTTATTTAGA TATTGTTGCC CACCATTGGC CGGGGGACAG TGAAAAATTG
GCGAGTATGT CAATAATTCA AGACGGTCCA GATCCTCACG TTCGCATGGC TTATCTCGCG
ATTGTGGCGA GTTTTTCTGT CAATGGTGTG GCGGGATTGC ATACGCAACT GTTGAAGTCA
GGTCTCTTTA ATGACTTTTA TACCCTGTGG CCCCATAAGT TTAATAATCG TACTAATGGT
GTTACCCCTA GACGATGGTT AGCCCATTGT AATCCTGCAC TTGCAAAGCT ATTGACGGCC
CATTTAGGGC ATCAATGGGT GACGGATTTA AGTCAATTGA CGGCATTGAA TGCCTTAACC
CAAGATGCGA GCTTTATTCA AAAATGGCGC GATGTTAAGC AAGCTAATAA GGTGCAGCTT
GCGAATATGA TATTGAAGGA ATGTGCGGTC GAGTTTGACC CGAGCATGTT GTTCGATGTG
CAGGTAAAAC GTATCCATGA GTATAAACGT CAACTGCTCA ATATCTTACA TGTGATCCAT
CTTTATCATC AGATCCAACA AGGTCGCATC GACAATATGG TACCGCGCTG CGTCTTGATC
GGTGGTAAGG CGGCTCCCGG TTACTTTATG GCAAAACTTG TCATCAAACT CGCCAGTAAT
GTGGCGCATA TGGTCAATTC TGATCCTGTG GTTGCCCCCT ATTTACGTTT TGCATTTTTA
CCCAATTATA ACGCCAGTGC CATGGAAAAA ATTTGTCCAG GGACTGATCT GTCTGAGCAA
ATTTCGACGG CGGGTAAAGA GGCTTCCGGT ACGGGCAATA TGAAATTTAT GATGAATGGC
GCCCTGACTA TAGGCACTTT AGACGGTGCG AATATCGAGA TGCTCGAAGA AGTCGGTGAG
GACAATTTTT TCCTCTTTGG ACTCAATGCC GAGCAAGTCG TACAGATGCG CAGTCATTAC
CAACCTAAGC AAATTATCGC TAATTCTCCG GCATTATCTG ACGTCATGGC GCTGCTGAAA
AGCGGCCATT TCAATTTACT CGAACCTGGG ATTTTCGATC CTATTATCGC GTCCATCGAG
AGTGAAGATG ATCCTTGGAT GACGGCGGCG GATTTTGATA GTTATCGCAC AGCCCAAGAA
GCGGTTGCTC GCGTTTATAA AGATCCCAAG CTGTGGACGC AAATGAGTAT TCGTAATAGT
GCCGCCAGTG GCCGTTTTTC AAGTGATGTC ACGATTGCCG GTTATCGCGA TGAGATTTGG
AAGTTGTAA
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| Protein sequence | MSNNSELSQN ISEAKAPKRA TKAMTTKASG GKTKSTAVPC EPCDALPASF ERHVRYGLSR
GQGVSCELFQ ALAISVKEQM LDNWRQTRLN DSRFERKQVV YLSLEFLMGR ALGNALLSLD
LQDESRDALS KYAVTLEELE EAEHDAGLGN GGLGRLAACF LDSCASMDLS VTGYGIRYEY
GMFAQKIVDG YQVERPDRWL REGNPWEVRV PNHNVIVPFF GHTESYVDKQ GRRHMIWVDT
QDVLAVAYDM PVPGYRNGRV NTLRLWKAEA TDDFDLAEFN QGDYTEAVAR KNLAEQITMV
LYPNDASENG KELRLRQQYF LSSASLQDLL KRWVHHHGND FSDFAAKNVI QLNDTHPSIA
VPELMRLLVD DYGLEWEAAW SITTHTMAYT NHTLLPEALE RWPVRMMALM LPRILEIIYE
INARYLDIVA HHWPGDSEKL ASMSIIQDGP DPHVRMAYLA IVASFSVNGV AGLHTQLLKS
GLFNDFYTLW PHKFNNRTNG VTPRRWLAHC NPALAKLLTA HLGHQWVTDL SQLTALNALT
QDASFIQKWR DVKQANKVQL ANMILKECAV EFDPSMLFDV QVKRIHEYKR QLLNILHVIH
LYHQIQQGRI DNMVPRCVLI GGKAAPGYFM AKLVIKLASN VAHMVNSDPV VAPYLRFAFL
PNYNASAMEK ICPGTDLSEQ ISTAGKEASG TGNMKFMMNG ALTIGTLDGA NIEMLEEVGE
DNFFLFGLNA EQVVQMRSHY QPKQIIANSP ALSDVMALLK SGHFNLLEPG IFDPIIASIE
SEDDPWMTAA DFDSYRTAQE AVARVYKDPK LWTQMSIRNS AASGRFSSDV TIAGYRDEIW
KL
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