| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1238 |
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| Symbol | |
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| ID | 5081550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1382530 |
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| End bp | 1384257 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498370 |
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| Product | malate synthase |
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| Protein accession | YP_001182765 |
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| Protein GI | 146292341 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.27419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGATTG GGGATGCTAC TGCTTTAGAA GTCAGCGTTA AGCCTGTGAA TAGTGGAGCC
TCTTGGGAGG GCATCAAGAT GACGGAACAC ACTTTGAGTG AGCAGCAATT GAATTCGACA
CTGGGTAAAG CCGCACCAAA CGCGACACTT GATATTGTGG GGCCTGATAT TCCTGGACAA
GAGGTGATTT TTACCGACGG GGCTGTAGCC TTACTCGAAT CTCTTTGCCG CGAGTTTGCT
GGCGAGGTTC CTGTGCTACT TGCTAAACGT AAAGAAAAGC AAGCTCGCAT CGATAAAGGG
GGATTACCAG ACTTCTTACC TGAAACCCGT GCTATTCGGG ATGGTGCGTG GCAAATCCGC
GGGATCCCAA CAGATCTTCT CGACCGTAGA GTCGAAATTA CTGGCCCCGT TGAACGTAAA
ATGGTGATCA ATGCGCTTAA TGCTAACGCA AAAGTATTTA TGGCCGATTT CGAGGACTCT
TTAGCGCCAA GTTGGCAAAA AGTGGTAGAA GGCCAGATTA ACCTGCGTGA TGCTGTTCGT
GGTGATATCG AATATACCGC GCCAGAAACA GGTAAACATT ACAAACTTGG CCCTCATCCG
GCAGTACTTA TTTGCCGTGT TCGCGGCTTA CATTTGAAAG AAAAGCATGT GCAATTTAAC
GGTGAGTCTA TTCCTGGTTC ACTGTTCGAT TTCGCACTGT ATTTCTATCA CAACTATCGC
CAACTCTTAG CAAAGGGTAG TGGTCCATAC TTCTATATTC CTAAGTTAGA AAGCCATATT
GAAGCTCGCT GGTGGGCAAA GGTGTTTGCT TTTGTTGAGG AAAGATTTTG TCTTCAAGCA
GGCACAATCA AATGTACTTG CCTGATTGAG ACTTTGCCTG CCGTGTTCGA GATGGACGAA
ATTCTCTATG AATTGCGGTC TAATATTGTG GCGCTTAATT GTGGCCGTTG GGATTACATT
TTCAGCTATA TCAAAACATT AAAACGCCAT AGCGACCGAG TGTTACCCGA TCGTCAAGCT
GTCACTATGG ATACACCCTT CTTAAGTGCT TATTCAAGAC TCCTGATTAA GACCTGCCAC
AAACGCGGTG CTTTAGCGAT GGGCGGTATG GCAGCCTTTA TTCCAGCAAA AGATCCCGCT
CAGAACGAAG CAGTATTGCA GCGGGTTCGT CGGGACAAAG AGCTTGAGGC GCGTAATGGC
CACGATGGTA CTTGGGTCGC CCATCCCGGT CTTGCTGATA CCGCGATGGG GATTTTTAAC
GAATATATAG GTCAAGATCA TTGTAATCAA TTACATATTA CCCGTGATGT AGATGCTCCC
ATTCTAGCGG CTGAGTTACT TAAAACCTGC GATGGTGAGC GTACTGAGCA AGGTATGCGT
CTTAATATTC GTATTGCGTT GCAGTATTTA GAGGCGTGGA TTAGTGGCAA TGGCTGTGTA
CCTATTTATG GTTTGATGGA GGACGCGGCT ACCGCCGAAA TTTCTAGAGC CTCAATTTGG
CAATGGATCC AACATGGTAA GTCACTCTCT AATGGCAAGC TTGTGACTAA GCAGCTCTTC
AAGGACATGT TGGTGGAAGA ACTCGCGAAT GTGAAGGAAG AAGTGGGAAG TGACAGATTT
ACCAGTGGCA AATTCACCCA AGCGGCGGTG TTACTGGAAG ATATTACTAC CTCTGATGAG
TTGGTCGATT TCTTAACTTT ACCCGGTTAC GAGATGCTAA CGGCTTAA
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| Protein sequence | MVIGDATALE VSVKPVNSGA SWEGIKMTEH TLSEQQLNST LGKAAPNATL DIVGPDIPGQ
EVIFTDGAVA LLESLCREFA GEVPVLLAKR KEKQARIDKG GLPDFLPETR AIRDGAWQIR
GIPTDLLDRR VEITGPVERK MVINALNANA KVFMADFEDS LAPSWQKVVE GQINLRDAVR
GDIEYTAPET GKHYKLGPHP AVLICRVRGL HLKEKHVQFN GESIPGSLFD FALYFYHNYR
QLLAKGSGPY FYIPKLESHI EARWWAKVFA FVEERFCLQA GTIKCTCLIE TLPAVFEMDE
ILYELRSNIV ALNCGRWDYI FSYIKTLKRH SDRVLPDRQA VTMDTPFLSA YSRLLIKTCH
KRGALAMGGM AAFIPAKDPA QNEAVLQRVR RDKELEARNG HDGTWVAHPG LADTAMGIFN
EYIGQDHCNQ LHITRDVDAP ILAAELLKTC DGERTEQGMR LNIRIALQYL EAWISGNGCV
PIYGLMEDAA TAEISRASIW QWIQHGKSLS NGKLVTKQLF KDMLVEELAN VKEEVGSDRF
TSGKFTQAAV LLEDITTSDE LVDFLTLPGY EMLTA
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