Gene Sputcn32_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1236 
Symbol 
ID5081548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1377460 
End bp1379229 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content45% 
IMG OID640498368 
Productpotassium efflux system protein 
Protein accessionYP_001182763 
Protein GI146292339 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCGT CGAGTTTACT CACTTCTGTG CTGTTATTTT TATTAGCCGC GGTTATTTTT 
GTGCCTTTGG GTAAACGCTT TGGTGCCGGC CCCATCCTGT CTTATCTCGC AGCGGGAGTC
ATTTTAGGCC CGGGTGGTAT GGCGTTAGTA TCTGATCCTG CTGCGGTATT GCATTTTGCT
GAGCTTGGTG TGGTGCTGAT GCTTTTTGTG CTCGGCCTTG AGCTTAATCC CAGTAAATTG
TGGGAACTGA GAAGTGCGAT TTTTGGCTTG GGCACGGGTC AGTTGTTACT CTCATGGGCT
GCTATTGGTG GATTGGCTTG GACCTTTGGT TTATCTATAG AGGCTGCTTT AGTCGTTGGC
GCGGCTTTAT CTTTATCGTC AACCGCTTTT GCCGTGCAAT TAATGAGTGA ACATCGATTA
TTAACAACTC CGCTAGGACG TGATGCCTTT GGTGTCTTGT TGATGCAAGA TCTTGCCGTT
ATTCCTATGC TGTTATTAAC GACTTACTTA GCACCTAATT CTGCACCAAT TGAACATCAT
GCAGTACCTT GGTATTGGAC GTGTTTGGCC TTAGTGAGTT TTGTATTAGT CGGCAAATAT
TTACTTCCAC GTATACTTAA GTTGGTCGCA AGTAGTGGTG TACGCGAAGT GCTTACCGCT
TTTGCATTAT TGCTCGTCAT GGGTAGTGCA GAGTTAATGG AATGGCTCGG ATTATCCGCA
GGTATGGGGG CCTTTATGGC GGGTATTATG CTTGCTAACT CGAGTTATCG ACACCAACTT
GAGACCGATA TCGAACCCTT TAAAGGATTG CTGCTGGGGC TCTTTTTTAT GGCTGTCGGT
ATGAGCATGG ATCTCTCGTT ACTGTTAACT GAACCACTAC TTATTTTATT CATTTTAATA
AGCATGTTAC TTATTAAAAC GATTGTTCTT ATGTTGCTTG GTCGCTTACG CCACCATAAG
TGGCGTCCGA GTATTGCCCT CGGTTTGATT TTGGCTGAAG GTGGTGAGTT TGCTTTTGTG
TTGTTATCTC AGGCTCAGAT TTCTGGCGTT GTAGGGGATA AGATCGCACA GATTTTAGTG
CTTGCTATTG GTTTGTCTAT GGCCGTTACG CCGATGATTT TTACGCTATT TCGTGCGACT
AAAGCCAAAG TGGTGGATAC AAGATTACCT GATACTATTA ATGTCACCGA ATCTGAGGTC
GTGATTGCGG GGTTTGGCCG TGTCGGGCAA ATCACGGGGC GTATATTGGC ATCATCTGGG
ATACCTTTTG TCGCCTTGGA TAAAGATGCA AGCCATGTTG ATGTTATTCG TAAATATGGC
GGTGAAGTCT ATTTTGGTGA CGCTAGGCGT TTAGATATGT TGATGTCGGC AGGAATTGCT
CGCTCAAGGT TATTATTGCT TGCTGTTGAT AATGTTGAGG ATTCCATTGA AATAGCTCAA
CAAGTCAAAA CTCACTTTCC TCACGTTAAT ATTGTTGCGC GAGCTCGGGA TCGTAACCAT
GCTTATCGTT TGATGAGTCT TGGGGTAACA GATGTGTTTC GCGAAACCTT TGGCTCGGCT
TTATCTGCCA GTGAAAAGAT TCTTCAAGGT CTTGGTTTAT CACAGGTGCA AGCCAATGAA
CGAGTTAAAA TTTTTGCTGA GCACGATAAA AAGCTGGTGA TTGCCAGTGC TGCCCACCAA
AATGATCTGG CCACCTTGAT TGATCTATCG AACAAAGGCA AGGCTGAGTT GGAATCATTA
ATGCGTGGCG ATAGAGAAAA CGTGAGCTAA
 
Protein sequence
MEPSSLLTSV LLFLLAAVIF VPLGKRFGAG PILSYLAAGV ILGPGGMALV SDPAAVLHFA 
ELGVVLMLFV LGLELNPSKL WELRSAIFGL GTGQLLLSWA AIGGLAWTFG LSIEAALVVG
AALSLSSTAF AVQLMSEHRL LTTPLGRDAF GVLLMQDLAV IPMLLLTTYL APNSAPIEHH
AVPWYWTCLA LVSFVLVGKY LLPRILKLVA SSGVREVLTA FALLLVMGSA ELMEWLGLSA
GMGAFMAGIM LANSSYRHQL ETDIEPFKGL LLGLFFMAVG MSMDLSLLLT EPLLILFILI
SMLLIKTIVL MLLGRLRHHK WRPSIALGLI LAEGGEFAFV LLSQAQISGV VGDKIAQILV
LAIGLSMAVT PMIFTLFRAT KAKVVDTRLP DTINVTESEV VIAGFGRVGQ ITGRILASSG
IPFVALDKDA SHVDVIRKYG GEVYFGDARR LDMLMSAGIA RSRLLLLAVD NVEDSIEIAQ
QVKTHFPHVN IVARARDRNH AYRLMSLGVT DVFRETFGSA LSASEKILQG LGLSQVQANE
RVKIFAEHDK KLVIASAAHQ NDLATLIDLS NKGKAELESL MRGDRENVS