Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1236 |
Symbol | |
ID | 5081548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1377460 |
End bp | 1379229 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640498368 |
Product | potassium efflux system protein |
Protein accession | YP_001182763 |
Protein GI | 146292339 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACCGT CGAGTTTACT CACTTCTGTG CTGTTATTTT TATTAGCCGC GGTTATTTTT GTGCCTTTGG GTAAACGCTT TGGTGCCGGC CCCATCCTGT CTTATCTCGC AGCGGGAGTC ATTTTAGGCC CGGGTGGTAT GGCGTTAGTA TCTGATCCTG CTGCGGTATT GCATTTTGCT GAGCTTGGTG TGGTGCTGAT GCTTTTTGTG CTCGGCCTTG AGCTTAATCC CAGTAAATTG TGGGAACTGA GAAGTGCGAT TTTTGGCTTG GGCACGGGTC AGTTGTTACT CTCATGGGCT GCTATTGGTG GATTGGCTTG GACCTTTGGT TTATCTATAG AGGCTGCTTT AGTCGTTGGC GCGGCTTTAT CTTTATCGTC AACCGCTTTT GCCGTGCAAT TAATGAGTGA ACATCGATTA TTAACAACTC CGCTAGGACG TGATGCCTTT GGTGTCTTGT TGATGCAAGA TCTTGCCGTT ATTCCTATGC TGTTATTAAC GACTTACTTA GCACCTAATT CTGCACCAAT TGAACATCAT GCAGTACCTT GGTATTGGAC GTGTTTGGCC TTAGTGAGTT TTGTATTAGT CGGCAAATAT TTACTTCCAC GTATACTTAA GTTGGTCGCA AGTAGTGGTG TACGCGAAGT GCTTACCGCT TTTGCATTAT TGCTCGTCAT GGGTAGTGCA GAGTTAATGG AATGGCTCGG ATTATCCGCA GGTATGGGGG CCTTTATGGC GGGTATTATG CTTGCTAACT CGAGTTATCG ACACCAACTT GAGACCGATA TCGAACCCTT TAAAGGATTG CTGCTGGGGC TCTTTTTTAT GGCTGTCGGT ATGAGCATGG ATCTCTCGTT ACTGTTAACT GAACCACTAC TTATTTTATT CATTTTAATA AGCATGTTAC TTATTAAAAC GATTGTTCTT ATGTTGCTTG GTCGCTTACG CCACCATAAG TGGCGTCCGA GTATTGCCCT CGGTTTGATT TTGGCTGAAG GTGGTGAGTT TGCTTTTGTG TTGTTATCTC AGGCTCAGAT TTCTGGCGTT GTAGGGGATA AGATCGCACA GATTTTAGTG CTTGCTATTG GTTTGTCTAT GGCCGTTACG CCGATGATTT TTACGCTATT TCGTGCGACT AAAGCCAAAG TGGTGGATAC AAGATTACCT GATACTATTA ATGTCACCGA ATCTGAGGTC GTGATTGCGG GGTTTGGCCG TGTCGGGCAA ATCACGGGGC GTATATTGGC ATCATCTGGG ATACCTTTTG TCGCCTTGGA TAAAGATGCA AGCCATGTTG ATGTTATTCG TAAATATGGC GGTGAAGTCT ATTTTGGTGA CGCTAGGCGT TTAGATATGT TGATGTCGGC AGGAATTGCT CGCTCAAGGT TATTATTGCT TGCTGTTGAT AATGTTGAGG ATTCCATTGA AATAGCTCAA CAAGTCAAAA CTCACTTTCC TCACGTTAAT ATTGTTGCGC GAGCTCGGGA TCGTAACCAT GCTTATCGTT TGATGAGTCT TGGGGTAACA GATGTGTTTC GCGAAACCTT TGGCTCGGCT TTATCTGCCA GTGAAAAGAT TCTTCAAGGT CTTGGTTTAT CACAGGTGCA AGCCAATGAA CGAGTTAAAA TTTTTGCTGA GCACGATAAA AAGCTGGTGA TTGCCAGTGC TGCCCACCAA AATGATCTGG CCACCTTGAT TGATCTATCG AACAAAGGCA AGGCTGAGTT GGAATCATTA ATGCGTGGCG ATAGAGAAAA CGTGAGCTAA
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Protein sequence | MEPSSLLTSV LLFLLAAVIF VPLGKRFGAG PILSYLAAGV ILGPGGMALV SDPAAVLHFA ELGVVLMLFV LGLELNPSKL WELRSAIFGL GTGQLLLSWA AIGGLAWTFG LSIEAALVVG AALSLSSTAF AVQLMSEHRL LTTPLGRDAF GVLLMQDLAV IPMLLLTTYL APNSAPIEHH AVPWYWTCLA LVSFVLVGKY LLPRILKLVA SSGVREVLTA FALLLVMGSA ELMEWLGLSA GMGAFMAGIM LANSSYRHQL ETDIEPFKGL LLGLFFMAVG MSMDLSLLLT EPLLILFILI SMLLIKTIVL MLLGRLRHHK WRPSIALGLI LAEGGEFAFV LLSQAQISGV VGDKIAQILV LAIGLSMAVT PMIFTLFRAT KAKVVDTRLP DTINVTESEV VIAGFGRVGQ ITGRILASSG IPFVALDKDA SHVDVIRKYG GEVYFGDARR LDMLMSAGIA RSRLLLLAVD NVEDSIEIAQ QVKTHFPHVN IVARARDRNH AYRLMSLGVT DVFRETFGSA LSASEKILQG LGLSQVQANE RVKIFAEHDK KLVIASAAHQ NDLATLIDLS NKGKAELESL MRGDRENVS
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