| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1235 |
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| Symbol | |
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| ID | 5081547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1375465 |
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| End bp | 1377198 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640498367 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001182762 |
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| Protein GI | 146292338 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACTA CAGTGGATTA TGATCAAGCA CTTAATGAGC TTGATGTATT GTTACAATCA
GATCTTGCGG CAGCACAGAA TAAATTAGCA GAGTATGAGA AGAATGTTGG TAAATTAACG
GCTCTCCAAT TGGGAAGGTT AAGAATGGGG CGTTCTATCA GTTATATTTT TACAGGTGAT
TACGCCAAAG CTTTAGAAGA TTTGAATCAG GCTGAATCTT TAGTGAGCAC TTCTGAACTA
TTGTCATCAG TCTATAGTTA TAAATCAACT GCTTATATCG GTATGAGAGA TTATGACAAG
GCCCTATCCT CTATTTCCAA GGCGCTTGCT TTAATAACGA GTATTGATGA TATCAGTATT
AAACGTCATG CTTATCTGCG TATTGCAAAT CTTTATTATC AAATGAATGC TCTCAATGAT
ATGGGTATCT ATGCCTATAA AGTATTACAG CTAGCAAAGG TAGGCGATGT TAGGGATATT
TGTCATGCAA AGGTTCTGTA TGCAATTTAT TTTTTAGGGG TAAAAAAGTA CACAGAAGGA
TTTGATGCTT TCGAAGATAG TCGCCAATAC TGCGAACTAA ATCAATTCCC TCTGCTAGCA
ACAATTTCTC TTAAAGGTAA GGGCTTAGTC CTTCAGGAAC AAGGTGATTA TCAAGCGGCA
AGGCCATTAT TATTAAATGC ACTTAAAGGT TATGAAGCAT TTAAGTTTCA GCTAGAAATC
AGTCATGTGC ATGCATTGCT CGCTGAAAAT TATTTTGCAA CGGGTGATAG AGTTCAAGCG
AAAACTCACG CCGTTAAAGT CCTCTCTTTT CCTGATGAAA ATAGCTATAT AGAGCATAAA
CATATTGCGT ATCAGGTGTT TGCTCAGCTG ATGGCAGCAG ATAAAAATTT CGAGCAAGCC
TATGAATACT CAAGAAAAGA GCAACATTAT AATCAATTGA TTTTTGATGA GTCCAAGATG
AAGACTCTCG CTTATCAAGC TGCCCAATTT AACGCCGACG AGCAGTCGCG TGAAATCAAT
TTACTCAATA AAGAGCGGGA ACTTTATATT GCTCAGCAAA TGGTAAAAGA GCGTGAATAC
ACTAATATGT TGATGTTTTT GACTATATTG GTAGGGGGGC TATTTTTTCT CGGCATTTTA
TTAGTCGTGG GAAGTTTACA AAAACGCAAG TTTATGCGGA TGGCAAGAAT GGATGCCTTG
ACGGGGGTAC TCAATCGTGG CGCCGGACAA GAATTAGGTG AAAACTTATT TGTGCAGGCT
ACCGCGCGTG GTGGTGATTT TTGTGTAATC TTATTCGACT TAGACTTTTT CAAACGAATT
AATGACTCCT ATGGTCATGG GACAGGTGAT TGGGCGCTGA AGAAGGTCGT TGAGTCACTT
AAATCCCAAA TCCGTAACGG TGATGTATTT GCTCGTATTG GTGGCGAGGA ATTTGCTATT
TTATTACCCT ATGCTAATGA AGAAAAAGGA ATGGAAGTGG CTGAGCAATG TCGGGCGCGA
ATAGAAGCGA TTGACACCCA ACACTCTGGG CACCATTTTA ACATTACTGC GAGTTTTGGT
GTGAGTGGAT TGATGGCAGA TGATTTGAGC CTCGATCCCT TGTTGCACCG TGCGGATATG
GCCCTTTATG CGGCGAAATC TAATGGGCGA AATACTGTTT ATTGTTACTC TGACATATTA
AAGTCAGATA AGCAGGCGAC CAGTTTGGGG AATCATTTTG CCAGCATGTC GTAG
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| Protein sequence | MATTVDYDQA LNELDVLLQS DLAAAQNKLA EYEKNVGKLT ALQLGRLRMG RSISYIFTGD
YAKALEDLNQ AESLVSTSEL LSSVYSYKST AYIGMRDYDK ALSSISKALA LITSIDDISI
KRHAYLRIAN LYYQMNALND MGIYAYKVLQ LAKVGDVRDI CHAKVLYAIY FLGVKKYTEG
FDAFEDSRQY CELNQFPLLA TISLKGKGLV LQEQGDYQAA RPLLLNALKG YEAFKFQLEI
SHVHALLAEN YFATGDRVQA KTHAVKVLSF PDENSYIEHK HIAYQVFAQL MAADKNFEQA
YEYSRKEQHY NQLIFDESKM KTLAYQAAQF NADEQSREIN LLNKERELYI AQQMVKEREY
TNMLMFLTIL VGGLFFLGIL LVVGSLQKRK FMRMARMDAL TGVLNRGAGQ ELGENLFVQA
TARGGDFCVI LFDLDFFKRI NDSYGHGTGD WALKKVVESL KSQIRNGDVF ARIGGEEFAI
LLPYANEEKG MEVAEQCRAR IEAIDTQHSG HHFNITASFG VSGLMADDLS LDPLLHRADM
ALYAAKSNGR NTVYCYSDIL KSDKQATSLG NHFASMS
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