Gene Sputcn32_1209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1209 
Symbol 
ID5081520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1354492 
End bp1355766 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content46% 
IMG OID640498340 
Producthypothetical protein 
Protein accessionYP_001182736 
Protein GI146292312 
COG category[S] Function unknown 
COG ID[COG3681] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCCC TATGGCAGCA GTATATTCAA ATCCTCAACC AAGTTGTAAA GCCAGCATTA 
GGCTGTACAG AGCCCATTGC TGCCGCCTAT GCATCTGCTG TTGCTCGCAC TTTATTAGGC
ATAGTTCCTG AAGCTATCTC AGTACAAGTC TCTGATAATT TATATAAAAA CTCTATGGGC
GTATATGTTC CTGGCACAGG TAAAATCGGC CTTGCTATCG CCGCTGCCGC AGGTGCTATT
GCCGGTAATG CAGAGGCAGG TTTAGAAGTG CTTGCCGCTA TTACCCCAGA ACAAGTCGCA
CAAGCACAAG ATCTTATTGA TGCTGGTAAG GTAAAAGTTG AACGAACTGA AACAGAAGAA
TTTATCTATT GCTGCGTCAC CTTAAAAGCG GGTGAGCAAG AAGCCTTAGT TAAAATTTGT
GGCGGTCACA CCTTAATTGC CGAAAAACGC CTTAATGGTG AGCCCGTTTT TACCGCGGAT
AACGCCCAGA GTGCCGCCAC AGGCTCTATC TGTGATGGCA TCGATATCAG TATTAAATCA
ATTTATCAGT TCGCTCAAGA AGTCCCCTTC GATCAGATCA AGTTCATCCT TAAAGCTTCC
GAATTAAATG GCAAGTTATC CGATGAAGGC ATGGCAAAGC CCTATGGACT CGAGGTGGGC
CGCACCATGA AAAGTGGTAT TGCGGCAGGA ATAATAGGCG AAGATTTACT CAATAAAATT
GTGATGTTAA CTGCTGCTGC ATCCGATGCG CGTATGGGCG GTGCCAATCT CCCCGCTATG
AGCAATTTAG GCAGTGGTAA TCAGGGAATT GCGGCGACGA TTCCTGTGGT ATTAACTGCG
CAATGCTATA ACGTCACCGA GGAAAAGCTC GCCCGCGCCT TAATAATGAG TCACTTAGGA
GCGATTTATA TCAAGTCCCA CTACCCACCA CTTTCTGCAT TCTGTGGTAA CACTGTAACC
AGTGCAGCGG CCTCTATGGC CATGGTATAT ATTGCTGGCG GCTCCTTCGA GCAATCCTGT
TTTGCGATTC AAAACGTCAT TAGTGATAGC TCGGGCATGG TCTGTGATGG TGCAAAAGCC
TCCTGTGCCA TGAAAGTCAG TACATCATCC AGTGCTGCGG TGCGGTCATT TTTAATGGCA
TTAAATAGTC AAAATGTTTC AGGCCAAGGC ATCATCGCAA CCGATGTGGA AAAAACCATA
AAAAACATTG GTAAAATGAT CCTTAATGGT ATGTCATCCA CCGATATCAC CATTATTGAT
ATAATGTCAA CGTAA
 
Protein sequence
MNPLWQQYIQ ILNQVVKPAL GCTEPIAAAY ASAVARTLLG IVPEAISVQV SDNLYKNSMG 
VYVPGTGKIG LAIAAAAGAI AGNAEAGLEV LAAITPEQVA QAQDLIDAGK VKVERTETEE
FIYCCVTLKA GEQEALVKIC GGHTLIAEKR LNGEPVFTAD NAQSAATGSI CDGIDISIKS
IYQFAQEVPF DQIKFILKAS ELNGKLSDEG MAKPYGLEVG RTMKSGIAAG IIGEDLLNKI
VMLTAAASDA RMGGANLPAM SNLGSGNQGI AATIPVVLTA QCYNVTEEKL ARALIMSHLG
AIYIKSHYPP LSAFCGNTVT SAAASMAMVY IAGGSFEQSC FAIQNVISDS SGMVCDGAKA
SCAMKVSTSS SAAVRSFLMA LNSQNVSGQG IIATDVEKTI KNIGKMILNG MSSTDITIID
IMST