Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1202 |
Symbol | |
ID | 5081612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1347860 |
End bp | 1348288 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640498333 |
Product | hypothetical protein |
Protein accession | YP_001182729 |
Protein GI | 146292305 |
COG category | [S] Function unknown |
COG ID | [COG3326] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAATA AACGACCATT TAAGCGAACA AACAACCGAG CCCCAAAGAC CAGCGTATCC AATACAAAGT TTAGCCTTAT ATCACTGTTA TTAGTGATTA TTTTCTTAAC GCTAATAATA GGTGCCACAT TTTGGCATTT ACTTCCCGTT GGAATAGTGG GTATGTACCT CACACTCAGT TTTCTCACCT TTATTGCCTA TGCCATTGAT AAATCCGCTG CAAAACGTAA TAAATGGCGA ACTAAAGAAA GCACATTACA CCTGCTCGCC CTTATGGGCG GTTGGCCAGG CGCCCTATTT GCCCAAAACC TGTTAAGGCA CAAATCCGTT AAAGCCTCAT TTAGAAACGT CTTTTGGCTC ACCGTTGTCG CTAACTTAGC CGTACTGGGT TATGGCATAA AAACGGGTGC CGTAGATATG TTTATCTAA
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Protein sequence | MTNKRPFKRT NNRAPKTSVS NTKFSLISLL LVIIFLTLII GATFWHLLPV GIVGMYLTLS FLTFIAYAID KSAAKRNKWR TKESTLHLLA LMGGWPGALF AQNLLRHKSV KASFRNVFWL TVVANLAVLG YGIKTGAVDM FI
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