Gene Sputcn32_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1202 
Symbol 
ID5081612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1347860 
End bp1348288 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content42% 
IMG OID640498333 
Producthypothetical protein 
Protein accessionYP_001182729 
Protein GI146292305 
COG category[S] Function unknown 
COG ID[COG3326] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAATA AACGACCATT TAAGCGAACA AACAACCGAG CCCCAAAGAC CAGCGTATCC 
AATACAAAGT TTAGCCTTAT ATCACTGTTA TTAGTGATTA TTTTCTTAAC GCTAATAATA
GGTGCCACAT TTTGGCATTT ACTTCCCGTT GGAATAGTGG GTATGTACCT CACACTCAGT
TTTCTCACCT TTATTGCCTA TGCCATTGAT AAATCCGCTG CAAAACGTAA TAAATGGCGA
ACTAAAGAAA GCACATTACA CCTGCTCGCC CTTATGGGCG GTTGGCCAGG CGCCCTATTT
GCCCAAAACC TGTTAAGGCA CAAATCCGTT AAAGCCTCAT TTAGAAACGT CTTTTGGCTC
ACCGTTGTCG CTAACTTAGC CGTACTGGGT TATGGCATAA AAACGGGTGC CGTAGATATG
TTTATCTAA
 
Protein sequence
MTNKRPFKRT NNRAPKTSVS NTKFSLISLL LVIIFLTLII GATFWHLLPV GIVGMYLTLS 
FLTFIAYAID KSAAKRNKWR TKESTLHLLA LMGGWPGALF AQNLLRHKSV KASFRNVFWL
TVVANLAVLG YGIKTGAVDM FI