| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1201 |
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| Symbol | |
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| ID | 5081611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1346436 |
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| End bp | 1347779 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640498332 |
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| Product | short chain fatty acid transporter |
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| Protein accession | YP_001182728 |
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| Protein GI | 146292304 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2031] Short chain fatty acids transporter |
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| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAACA AAGCGGCAAA ACCTTTGGTC AAACTCGTCG ACCGATATCT ACCTGATCCC
TATATTTTCG TGCTTTTACT TACCTTAGTC GTATTAATTG CTGCTGTGGT CGCTGAACAT
AAAACCCCGC TGGAAGTCAT CAATTATTGG GGCGATGGCT TTTGGACCCT GTTAAGTTTT
TCGATGCAAA TGCTATTAGT GCTGGTGGCA GGATTTATGT TGGCTAGTTC ACCACCGATT
AAAAAATTGC TCGATGCCAT TGCTGGACTC GCCAAGTCTG CCCCTCAGGC CATTATCTTA
GTGACGTTAG TTTCCCTCGC TGCCAGTTGG ATTAACTGGG GTTTTGGGCT AGTGGTGGGG
GCGTTATTTG CTAAAGCCCT CGCGAGAAAA GTGAAAGTCG ATTATCGGCT GTTGGTTGCC
AGCGCCTATT CCGGCTTTGT GGTTTGGCAT GGTGGGCTTG CGGGTTCGAT CCCATTAACC
ATAGCGACAG CGGGACATTT CTCCGAATCA CAAATTGGCA TAATTCCCAC CAGTGACACC
ATTTTCGCGG GCTTTAATTT ACTGTTAGTG GCGATTCTGT TTGTGTCCAT GCCATTAGTG
AATCGCTTTA TGCTGCCAGG AGAAAAAGAC AGTATTTATA TCGACCCAAG CACTCTCGAT
GAAAAAGATG GTGAGGTTGC GAGTACAACG CTGGAGATGC ATAACGCCAA TTTGAACGAC
AGCCGTCCTG CGGATAAGTT AGAAAATAGC CGTTTACTCG GCTGGAGTGT CGGTGGTGCT
GGGCTTGTAT ATTTAGGTTA TTACTTTTGG GTGCAGGGCG GCAGCCTAAA CCTCAACGTA
GTGAACTTCT TATTTCTGTT TCTCGCCATA TTGTTACATC AAACACCACG CAGTTTGCTG
ATCAGTCTTA ACGAGGCCAT TAAAGGCGGC GCAGGTATTG TTATCCAATT TCCCTTTTAT
GCGGGCATTA TGGCTGTGAT GGTGCAATCG GGTTTAGCTC AAAGTATTTC GGAAGGTTTT
GTGGCGATTG CTAGCGCCGA GAGTCTGCCA TTTTGGAGCT TTATCAGTGC AGGAATTGTG
AATATTTTTG TGCCATCGGG AGGTGGCCAA TGGGCCGTGC AGGCACCGAT TATGTTACCT
GCCGCACAGG CTTTAGGCGC CGATGTGGCA CGTGTGGCTA TGGCTGTGGC TTGGGGCGAT
GCGTGGACTA ACTTGATTCA ACCTTTCTGG GCACTGCCCG TGCTGGCGAT TGCAGGCTTA
AAAGCGCGGG ATATTATGGG CTTTTGTTTA ATGCAATTGA TGATCACTGG CGTGATTATC
AGTATCGCGT TGAGCTGGTT CTAA
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| Protein sequence | MLNKAAKPLV KLVDRYLPDP YIFVLLLTLV VLIAAVVAEH KTPLEVINYW GDGFWTLLSF
SMQMLLVLVA GFMLASSPPI KKLLDAIAGL AKSAPQAIIL VTLVSLAASW INWGFGLVVG
ALFAKALARK VKVDYRLLVA SAYSGFVVWH GGLAGSIPLT IATAGHFSES QIGIIPTSDT
IFAGFNLLLV AILFVSMPLV NRFMLPGEKD SIYIDPSTLD EKDGEVASTT LEMHNANLND
SRPADKLENS RLLGWSVGGA GLVYLGYYFW VQGGSLNLNV VNFLFLFLAI LLHQTPRSLL
ISLNEAIKGG AGIVIQFPFY AGIMAVMVQS GLAQSISEGF VAIASAESLP FWSFISAGIV
NIFVPSGGGQ WAVQAPIMLP AAQALGADVA RVAMAVAWGD AWTNLIQPFW ALPVLAIAGL
KARDIMGFCL MQLMITGVII SIALSWF
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