| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1195 |
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| Symbol | |
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| ID | 5081605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1338622 |
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| End bp | 1339923 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498326 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001182722 |
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| Protein GI | 146292298 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTTG AATCTTTTAG TTTTTCCCCC GAGATTTTGC GCGCTATCTC AGATTGCGGT
TATCAACAAA TGACGCCTAT TCAGCAACAA GCGATACCCG CTATTCGCCG CGGCCAAGAT
GTGCTCGCCA GCGCCCAAAC GGGTACAGGT AAAACTGCCG CCTTTGCCCT GCCCATTCTG
CAAAAGATGG TTGAAAAACC AAGCGAAACT TTAAAGTCGA ATGCAAGAGT ATTAATTCTT
ACTCCAACCC GCGAGCTTGC GGCTCAAGTG GCTGACAACG TCACGGCTTA CTGTAAATAT
TTAAATTTTA GCGTATTAAC CATTTATGGC GGCGTAAAGA TTGAGACTCA AGCGCAAAAG
CTCAAACGCG GTGCCGATGT TATAGTCGCG ACCCCAGGTC GTTTACTCGA ACACTTAACC
GCCTGTAATG TAAGTTTATC AAACGTCGAT TTTTTAGTGC TCGATGAAGC CGATCGAATG
CTCGATATGG GCTTTAGTGC CGACATCCAA AAAATTCTGC AAGCGGTAAA TAAAAAGCGT
CAAAACTTAC TGTTTTCAGC AACCTTCTCC AGCGCAGTCA AAAAACTCGC CAACGATATG
ATGGTCAAAC CGCAGGTGAT CAGCGTCGAC AAGCAAAACA CGACAGCAGA TACCGTAAGC
CAAGTGGTTT ACCCTGTGGA ACAACGCCGT AAACGTGAAT TACTATCAGA ACTTATTGGC
AAGAAAAACT GGCAACAGGT ATTGGTATTT ACCGCAACCC GTGAAGCCGC AGATACTTTA
GTTAAAGAGT TAAATTTAGA TGGTATCCCA TCAGAAGTGG TCCACGGAGA AAAAGGCCAA
GGAAGCCGTC GCCGCGCCCT GCGTGAATTT GTGGCGGGTG ATGTGCGCGT ACTGGTTGCT
ACTGAAGTTG CCGCCCGCGG CTTAGATATT CCAAGCCTTG AATACGTGGT TAACTATGAT
TTACCTTTCC TCGCAGAGGA TTATGTTCAC CGTATCGGTC GTACTGGCCG TGCAGGTAAA
ACAGGGGTTG CCATCTCATT TGTTAGCCGC GAAGAAGAAC GTACCTTAGC CGATATCGAA
AAATTGATCG GTCAAAAAAT TCGCCGCGTC ACAGTTCCGG GCTATGAAGT GGGTAGCCGC
GAATTGCTAT TAAAACAACT GCAAACCCGT CGCAGTTTTG CTAAAAAACA GCAAAGAACC
GACAATGCTG GCGCCCAAGT TATTGCAGAA AAAAGCATGC AAGGTCGCCG CGTAAAAGTG
AAGGTTGGCC AAGCACCAAG TAAAGCCAAA AAACTTAAAT AA
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| Protein sequence | MRFESFSFSP EILRAISDCG YQQMTPIQQQ AIPAIRRGQD VLASAQTGTG KTAAFALPIL
QKMVEKPSET LKSNARVLIL TPTRELAAQV ADNVTAYCKY LNFSVLTIYG GVKIETQAQK
LKRGADVIVA TPGRLLEHLT ACNVSLSNVD FLVLDEADRM LDMGFSADIQ KILQAVNKKR
QNLLFSATFS SAVKKLANDM MVKPQVISVD KQNTTADTVS QVVYPVEQRR KRELLSELIG
KKNWQQVLVF TATREAADTL VKELNLDGIP SEVVHGEKGQ GSRRRALREF VAGDVRVLVA
TEVAARGLDI PSLEYVVNYD LPFLAEDYVH RIGRTGRAGK TGVAISFVSR EEERTLADIE
KLIGQKIRRV TVPGYEVGSR ELLLKQLQTR RSFAKKQQRT DNAGAQVIAE KSMQGRRVKV
KVGQAPSKAK KLK
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