Gene Sputcn32_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1188 
Symbol 
ID5081598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1332117 
End bp1332761 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content44% 
IMG OID640498319 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001182715 
Protein GI146292291 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACCA GAAGAGGAAT GCTTAAAGGC AGTATGGGCG TTGCTGTCGG TACAGTCTAT 
AGCGGAACAT TGGTGAGTTT TCTTACCGGT TGTGGCAGTG ACAGTAATAG CCAAGAAAAA 
GTAGAAGTCA TGCCAGGTGG ACTCATGGTG GTAAACCCTA CAGTTTGTGT GAGTTGTAGA 
CGCTGTGAAA TAGCCTGTGG TTGGAACCAT GAAGGGGATA GCAGTCCCAC ACTCGCTCGT 
GTCAAAGTAG AAAAAAATAT GAACTATGGC CCACATGGCG TGCAATTTGA CTATGAAATA 
CAGCGAGGTG AATGCGGTGA CAGAACCGTT GTGCCTTCAA CTTGTCGTCA CTGTGAAGTG 
TGTACTGAAG TGTGCCCGCA GCAAGCTATT TCAACAAATC AACAAACTGG CGCCAAAGTC 
ATTGATGAAG AGCGTTGCGT TGGATGTGGT TATTGTGCAG ATAAGTGCCC TCAGCAAGTC 
ATTAAAGTTG TTCGCAGCAA AATGAAAGCA GTGAAATGTG ATTTATGTAA CGGTAAACCT 
GCATGCGCGC AAGTTTGTCC TACAGGTGCA ATTAAATTTT ATAACTGGGA AGAGGCTGAA 
GCTGCATTAG AACAATATGA AAAATATACC GGCTTAGTTT CTTAA
 
Protein sequence
MITRRGMLKG SMGVAVGTVY SGTLVSFLTG CGSDSNSQEK VEVMPGGLMV VNPTVCVSCR 
RCEIACGWNH EGDSSPTLAR VKVEKNMNYG PHGVQFDYEI QRGECGDRTV VPSTCRHCEV 
CTEVCPQQAI STNQQTGAKV IDEERCVGCG YCADKCPQQV IKVVRSKMKA VKCDLCNGKP 
ACAQVCPTGA IKFYNWEEAE AALEQYEKYT GLVS