Gene Sputcn32_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1172 
Symbol 
ID5081582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1312512 
End bp1313603 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content46% 
IMG OID640498303 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001182699 
Protein GI146292275 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000023655 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAGG ATACGATTAA CAACGTACAC ATCAGTTCAG AGAAAGTCTT AATCACGCCG 
CAAGAGCTTA AAAATGCCTT GCCACTGTCT GAGCATGCCT ATCGTTATAT TCTTAATGCC 
CGTAAAACTG TGGCTGATAT TGTCCATAAA CGTGATAACC GTGTGTTGAT TGTGGCGGGA 
CCTTGCTCCA TACATGATAT CGCCGCTGCA AAAGAATACG CTTTAAGGCT TAAAACTCTG 
CACGATGAAC TCAGTGATGA GTTTTACATC TTAATGCGAG TCTACTTTGA AAAGCCGCGT 
ACTACGGTCG GTTGGAAGGG CATGATTAAC GACCCCGATA TGGACGAATC CTTCGATGTC 
GAAAAAGGCT TAAAGATGGC GCGTGAACTG ATGATTTGGC TCGCCGAGCT TGAACTGCCC 
GTCGCCACTG AAGCACTCGA TCCTATTAGC CCACAATACA TTTCTGAATT AGTCACTTGG 
TCTGCTATTG GCGCTCGCAC CACTGAATCG CAAACCCATA GGGAAATGGC ATCGGGTCTG 
TCTATGCCGG TGGGCTTTAA AAATGGCACC GATGGTAAGC TCGATGTAGC GATTAATGCG 
CTAAAATCGG CGGCCAGTAG CCACAGATTT ATGGGCATAA ATCAACAGGG CCAAGTAGCG 
CTATTGCAAA CTGCAGGTAA TCCAGATGGA CATGTGATTT TACGTGGTGG TGCAATGCCC 
AACTATGATG CGGCGAGTGT GGCAGAATGT GAGGCGCAGC TTCATAAAGC CAAACTTAAT 
GCCCGCCTTA TTATCGATTG CAGCCATGGC AATTCTTCTA AGGATTACAC GCGGCAGATA 
CCTGTGTGTG AAGATGTTTT TGCGCAGATC TACAATGGTA ACAAGTCCAT TATCGGGGTG 
ATGTTAGAAA GTCACCTAAA TGAAGGCAAT CAAAGTTGTG ATAGGCCATT AAGCGAGCTA 
GCTTACGGTG TTTCTGTGAC AGATTCTTGT ATTAATTGGG AAAAAACAGA AACTGTTTTA 
CGTCAAGGCG CTGCGAAGTT ATCTTCAATA CTTCCAACGC GTTTCGATAT GCTTAAGGTC 
GCTAACGCTT AA
 
Protein sequence
MQQDTINNVH ISSEKVLITP QELKNALPLS EHAYRYILNA RKTVADIVHK RDNRVLIVAG 
PCSIHDIAAA KEYALRLKTL HDELSDEFYI LMRVYFEKPR TTVGWKGMIN DPDMDESFDV 
EKGLKMAREL MIWLAELELP VATEALDPIS PQYISELVTW SAIGARTTES QTHREMASGL 
SMPVGFKNGT DGKLDVAINA LKSAASSHRF MGINQQGQVA LLQTAGNPDG HVILRGGAMP 
NYDAASVAEC EAQLHKAKLN ARLIIDCSHG NSSKDYTRQI PVCEDVFAQI YNGNKSIIGV 
MLESHLNEGN QSCDRPLSEL AYGVSVTDSC INWEKTETVL RQGAAKLSSI LPTRFDMLKV 
ANA