| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1162 |
|---|
| Symbol | |
|---|
| ID | 5081572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1304329 |
|---|
| End bp | 1305066 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640498293 |
|---|
| Product | pyridoxine 5'-phosphate synthase |
|---|
| Protein accession | YP_001182689 |
|---|
| Protein GI | 146292265 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.331804 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGTA TCTTATTGGG CGTGAATATC GACCATATTG CTACTCTGCG CCAAGCCCGT
GGCACCAGTT ATCCCGATCC TGTGCATGCA GCTGCCGTTG CTGAACATGC TGGCGCCGAT
GGCATCACTA TCCATTTGCG TGAAGACCGA CGCCATATCA TAGACCGCGA TGTATATCTG
TTGGCAAAAA CCTTGAAAAC CCGCATGAAT TTTGAATGTG CGGTGACCGA AGAAATGCTT
AACATCGCCT GTGAAATTAA GCCGACCTAT GTCTGTTTAG TGCCAGAAAA ACGCCAAGAA
GTCACCACTG AGGGTGGTTT AGATGTGGCA GGGCAGTTAG ATAAAATCAC TGCTGCAGTG
ACTCGTTTAG CTGCTGAGGG TATTCAAGTC TCCTTATTTA TCGATGCGGA TAAAACTCAA
ATTGATGCCG CTGTTGCCTC TGGCGCACCG CTTATTGAAA TTCATACTGG CTGTTATGCC
GATGCTAAAA CTGAAGCGGA AGAAGCTATT GAGTTAGCAC GTATCAGCGA AATGGCTAAA
TACGCCCATG GCAAAGGCTT AGTGGTGAAT GCCGGCCATG GTTTGCATTA TCACAACGTG
AAACCGATTG CGGCGATTCC TGAGTTATAT GAGCTCAATA TCGGTCATGC GATTGTCGCA
CGTGCTGCCA TTGACGGTTT AGCGACGGCA GTGAAAGACA TGAAAGCGTT AATGCTTGAA
GGTCGCCGAG GCGAATAA
|
|---|
| Protein sequence | MSRILLGVNI DHIATLRQAR GTSYPDPVHA AAVAEHAGAD GITIHLREDR RHIIDRDVYL
LAKTLKTRMN FECAVTEEML NIACEIKPTY VCLVPEKRQE VTTEGGLDVA GQLDKITAAV
TRLAAEGIQV SLFIDADKTQ IDAAVASGAP LIEIHTGCYA DAKTEAEEAI ELARISEMAK
YAHGKGLVVN AGHGLHYHNV KPIAAIPELY ELNIGHAIVA RAAIDGLATA VKDMKALMLE
GRRGE
|
|---|
| |