| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1152 |
|---|
| Symbol | |
|---|
| ID | 5081662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 1294300 |
|---|
| End bp | 1295913 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640498283 |
|---|
| Product | L-aspartate oxidase |
|---|
| Protein accession | YP_001182679 |
|---|
| Protein GI | 146292255 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0029] Aspartate oxidase |
|---|
| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.172404 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAG TAGTTGAACA CCAATCTGAC ATATTAGTCA TAGGTAGCGG TGCCGCAGGT
CTGACACTAG CTTTGCATCT TGCTGAAAAA GCGAAAGTAA TTCTGCTCTC AAAAGGCCCA
CTCTCTGAAG GGTCGACCTA CTACGCTCAA GGCGGTATCG CTTCCGTCTT CGATGAAGGC
GACACTATCG AATCCCATGT CGCTGATACT TTGATCGCAG GAGCAGGCTT GTGCGATAAA
GACGTTGTGA CTTTTACCGC TGAAAATGCC AAAAGTGCTA TGCAATGGCT TATCCAATGC
GGTGTTGCCT TTGATAAAGA AGAAACAAAC GGTGGCAACG CTGCGGACGC TCCCTATCAC
CTCACCCGTG AAGGTGGTCA CAGTCACAGA CGTATTTTGC ATGCTGCCGA TGCCACAGGT
AAGGAAGTGC AAACAACATT GCAAGCTCGT GCACTAGCCC ACCCTAATAT TCAAGTATTA
GAACGCTATA ACGCCATTGA TTTAATTACG ACTCGCAAAC TAAATCGCCC AGGGAATCGC
GTTCTAGGGG CTTATGTGTG GAATCGTAAT GAAGAGCATG TTGAAACTGT AAAAGCTAAA
TTTGTCGCTT TGGCAACTGG TGGCTGTTCA AAAGTTTATC AGTATACATC TAACCCGGAT
GTTGCCAGTG GTGATGGAAT AGCCATGGCA TGGCGTGCCG GTTGCCGAGT GGCAAATATG
GAGTTTAATC AATTTCACCC CACTTGTTTA TACCATGCCG ATGCTCGTAA CTTTTTGTTG
ACCGAAGCCC TTCGCGGCGA AGGCGCTTAT CTACGCCGTC CTGATGGTAG CCGTTTTATG
CCAGATTTTG ATGAACGTGC CGAACTCGCC CCCCGCGATA TTGTTGCTCG GGCTATCGAT
TACGAAATGA AACGTCTCGG GGCTGACTGT GTATACCTAG ATATCAGCCA CAAAGACGCT
GATTTTATTG TTAAGCACTT CCCAACCATT TATAGCCGTT GCTTAGAATT AGGTATTGAT
ATTACTCAAG ATGCGATTCC GGTTGTTCCC GCAGCACACT ATACCTGTGG CGGTGTGATG
ACCGATTTGC ATGGCCAAAC TGATCTAAAT GGTCTTTACG CGATAGGAGA AGTCGCCTAT
ACAGGTCTTC ATGGAGCCAA TCGCCTTGCG AGTAACTCGC TTCTCGAATG CCTAGTATTT
GCCCGTGCCG CATCCCATGA TATTGAAAGC CAATTACATA AAATTCAATT ACCTGGACAA
ATTCCTCCTT GGGATGAGAG TAAAGTCTCT AACTCGGATG AAGAAGTCGT TATCGCCCAT
AACTGGCATG AGCTGCGGCT ATTCATGTGG GACTACGTAG GAATTGTTCG CTCAGATAAA
CGCTTAGAGC GGGCACTGCG TCGCTGTTTA ATGTTACAAC AGGAAATTCA AGAGTATTAC
AGTAACTTTA GAGTGAGTAA TAACTTGTTA GAACTGCGAA ATTTAGTGCA AGTAGCAGAG
CTTATAATCC GTTGTGCCAT GGAACGTAAA GAAAGCCGAG GACTGCATTA CAATATTGAT
CATCCAGAGA AACTCGACTC ACCTCGTCCA ACTATTTTAC AACCTATTAA GTAA
|
|---|
| Protein sequence | MKQVVEHQSD ILVIGSGAAG LTLALHLAEK AKVILLSKGP LSEGSTYYAQ GGIASVFDEG
DTIESHVADT LIAGAGLCDK DVVTFTAENA KSAMQWLIQC GVAFDKEETN GGNAADAPYH
LTREGGHSHR RILHAADATG KEVQTTLQAR ALAHPNIQVL ERYNAIDLIT TRKLNRPGNR
VLGAYVWNRN EEHVETVKAK FVALATGGCS KVYQYTSNPD VASGDGIAMA WRAGCRVANM
EFNQFHPTCL YHADARNFLL TEALRGEGAY LRRPDGSRFM PDFDERAELA PRDIVARAID
YEMKRLGADC VYLDISHKDA DFIVKHFPTI YSRCLELGID ITQDAIPVVP AAHYTCGGVM
TDLHGQTDLN GLYAIGEVAY TGLHGANRLA SNSLLECLVF ARAASHDIES QLHKIQLPGQ
IPPWDESKVS NSDEEVVIAH NWHELRLFMW DYVGIVRSDK RLERALRRCL MLQQEIQEYY
SNFRVSNNLL ELRNLVQVAE LIIRCAMERK ESRGLHYNID HPEKLDSPRP TILQPIK
|
|---|
| |