| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1149 |
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| Symbol | nhaR |
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| ID | 5081659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1292600 |
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| End bp | 1293508 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640498280 |
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| Product | transcriptional activator NhaR |
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| Protein accession | YP_001182676 |
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| Protein GI | 146292252 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.291866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCATC TCAATTATAA CCATTTATAT TATTTCTGGA TGATCAAAAA AAAGGGCTCT
GTTGCTAAGG CGGCTGAGGC CCTTTTCTTG ACACCACAAA CAATCACAGG TCAGATCAGA
GCCTTAGAAG ACCGGCTTAA TGGTAGCTTA TTCAAGCGTG TGGGGCGTAG TCTTGAGGCG
ACTGAACTCG GGGAGCTTGT CTTTCGCTAT GCAGATAAGA TGTTTAGCTT AAGCTATGAA
ATGCTCGACC TACTGAACTA CCAAAAAGAT AATGCCATTC TCTTTGAAGT GGGTATTGCT
GATGCTCTAT CTAAAGCGTT GGTTAGTCGA GTTTTATTAT CTGTAGTACC TAGTGATAGC
TCAATGCATT TAGCCTGTTA TGAGGCGACA CATGAGAGTT TAATGGCACG TTTACGTGAA
CATAAACTGG ATATGATTCT ATCGGATTGT GCTGGAGAGT CGCTAAAGTA CCCAGAGATT
TTATCTAAAA AATTGGGAGA GTGTGGCGTC AGTTTTTTTT CAGCAGACAC TTACAGCGCC
GACTTTCCTG CATGTTTAGA ACAAGGTCGC CTATTGATTC CTGGACGTAA AACCTCCCTT
GGACAGCAGT TATATCGCTG GTTTGACGAG CAAAATCTTA ATGTAAAAAT TCTCGGGGAA
TTTGATGATG CTGCGATGAT GAAGGCTTTT GGCTACCTTA AACGCGGTAT ATTTGTCACA
CCGTCTATTT ATCGCCAAGA AGTTATCTCC CACGGTATGA ATCTGCTTGG TGAAACCCAT
GATGTGAAGG AGGAGTATCA CGTGATGTTT GCTGAGCGTA TGATCCAACA TCCCGCAGTT
AAGCGATTGC TCGAAACGGA TTTTAGTGAT TTGTTTGCTG GTCTAGATGC ACAAGTTCAG
CAATGCTAA
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| Protein sequence | MLHLNYNHLY YFWMIKKKGS VAKAAEALFL TPQTITGQIR ALEDRLNGSL FKRVGRSLEA
TELGELVFRY ADKMFSLSYE MLDLLNYQKD NAILFEVGIA DALSKALVSR VLLSVVPSDS
SMHLACYEAT HESLMARLRE HKLDMILSDC AGESLKYPEI LSKKLGECGV SFFSADTYSA
DFPACLEQGR LLIPGRKTSL GQQLYRWFDE QNLNVKILGE FDDAAMMKAF GYLKRGIFVT
PSIYRQEVIS HGMNLLGETH DVKEEYHVMF AERMIQHPAV KRLLETDFSD LFAGLDAQVQ
QC
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