| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1146 |
|---|
| Symbol | thyA |
|---|
| ID | 5081656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1290023 |
|---|
| End bp | 1290817 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640498277 |
|---|
| Product | thymidylate synthase |
|---|
| Protein accession | YP_001182673 |
|---|
| Protein GI | 146292249 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0207] Thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR03284] thymidylate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.153676 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAGT ATTTAGACTT AATGAAGCAC ATTTTAGCTG AGGGTGTGGA TAAATCGGAT
CGTACCGGTA CTGGAACTCG TTCAGTATTT GGATATCAAA TGCGTTTTGA TTTAAGTAAA
GGATTTCCCT TAGTAACGAC TAAAAAATGC CATATGCGCT CTATTATTCA TGAGTTACTG
TGGTTCCTGA AAGGTGAGAC TAACATTGCT TACCTTCGTG AAAATAAAGT GAGTATTTGG
GATGAATGGG CCGATGATAA TGGCGATTTA GGCCCGGTTT ATGGCGCCCA ATGGCGGAGC
TGGCCAACTC AGAGTGGTGA TGCTATTGAC CAAATATCAC AAGTTATCGC TCAGATTAAA
GCTCAACCAG ACTCTCGTCG TTTAATCGTT TCTGCATGGA ATGTTGGTGA ACTCGATAAA
ATGGCTTTAG CGCCTTGCCA TGCTTTTTTT CAGTTCTATG TGGCTGATGG CAAGTTATCC
TGTCAGCTCT ATCAACGCAG TTGTGATGTT TTCCTCGGCT TACCATTTAA TATTGCTAGT
TACGCACTAC TAACGATGAT GGTTGCCCAG CAGTGTGATT TAGCGCTTGG TGATTTTGTG
TGGACAGGGG GGGATACGCA TTTGTATTCC AATCATATGG AACAAACAGT GCTGCAATTG
AGCCGGGAAC CCAAACCGTT ACCTTTAATG ACGATTCTGC GTAAACCTGA ATCTATTTTC
GACTATCAAT TCGAAGATTT TGAACTGACA AATTACAATC CTCATCCTCA CATCAAAGCT
CCTGTCGCCG TTTAG
|
|---|
| Protein sequence | MQQYLDLMKH ILAEGVDKSD RTGTGTRSVF GYQMRFDLSK GFPLVTTKKC HMRSIIHELL
WFLKGETNIA YLRENKVSIW DEWADDNGDL GPVYGAQWRS WPTQSGDAID QISQVIAQIK
AQPDSRRLIV SAWNVGELDK MALAPCHAFF QFYVADGKLS CQLYQRSCDV FLGLPFNIAS
YALLTMMVAQ QCDLALGDFV WTGGDTHLYS NHMEQTVLQL SREPKPLPLM TILRKPESIF
DYQFEDFELT NYNPHPHIKA PVAV
|
|---|
| |