Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1141 |
Symbol | |
ID | 5081651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1284178 |
End bp | 1284849 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640498272 |
Product | DNA mismatch repair protein |
Protein accession | YP_001182668 |
Protein GI | 146292244 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3066] DNA mismatch repair protein |
TIGRFAM ID | [TIGR02248] DNA mismatch repair endonuclease MutH |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000591813 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAA TTATCCCTCC AGAAAATCTT ACCGAATTAC TCGAGCGCGC CAATATGATG GCTGGCGTAA GTTTGGCACA AATTGCTGCT AATAGAGGAA TAACCGTCCC CAAAAATCTT AAGCGAGATA AGGGCTGGGT TGGCCAACTC ATCGAAATGG AATTGGGTGC AACAGCGGGC TCTAAACCTG AACAAGACTT TTTACATCTA GGTGTCGAGC TCAAAACCAT TCCCATAAAT GTACAAGGAA AACCGTTAGA AACAACCTAT GTATGTGTCG CGCCGCTCTC GCAAATTGAA GGACTAACTT GGGAAAACAG CCTAGTCTGC CACAAACTAC AGCGCGTGCT TTGGGTTCCC GTCGAGGGTG AAAGACAAAT ATCTGTCGGT GCTCGCCGTA TTGGCACGCC TATTTTATGG CAACCAGATC CCGATGAATT ACGTCTATTA CAACAAGATT GGGAGGAAAT AATGGAGCTT ATTGCGCTAG GAAAAGTTGA GAAACTCACA GCCCGTCACG GCGAAGTATT ACAACTACGG CCAAAAGCAG CCAATAGCAG AGCATTAACG CAAAGCATTG CCGAAAATGG TAGCCTCAAA ATGACCAATC CTCGTGGCTT TTATTTAAAG ACCGCTTTTA CCGCCATGAT ACTAAATAAA GCTTTTGGTT AA
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Protein sequence | MKAIIPPENL TELLERANMM AGVSLAQIAA NRGITVPKNL KRDKGWVGQL IEMELGATAG SKPEQDFLHL GVELKTIPIN VQGKPLETTY VCVAPLSQIE GLTWENSLVC HKLQRVLWVP VEGERQISVG ARRIGTPILW QPDPDELRLL QQDWEEIMEL IALGKVEKLT ARHGEVLQLR PKAANSRALT QSIAENGSLK MTNPRGFYLK TAFTAMILNK AFG
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