| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1135 |
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| Symbol | gltD |
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| ID | 5081645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1273725 |
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| End bp | 1275131 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640498266 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001182662 |
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| Protein GI | 146292238 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAACG ATTTTCAATT TATTGAAGTG GGTCGTAAAG ACCCCGCTAA ACACCCTGCA
GCTAAACGTG CGACTCAGTT TATTGAGATT TATCAGCCTT TTGCTCAGCC TCAAGTAGCC
GAGCAAGCGG ACCGCTGTTT AGATTGCGGC AATCCTTATT GTGAGTGGAA ATGCCCGCTA
CACAATTATA TTCCTAACTG GCTCAAGCTA GCGGAACAAG GCCGCATCAT GGAAGCGGCA
GATTTAGTGC ATGAGACCAA CACTCTGCCC GAAATCTGCG GCCGTGTTTG TCCACAGGAC
AGACTCTGTG AAGGTGCTTG TACTCTGAAC GACGACTTTG GCGCTGTCAC TATAGGTAAT
GTCGAAAAAT ACATTACCGA TACCGCTATC GCCCAAGGCT GGCGCCCCGA TATGAGCAAG
GTCACGCCAC GCCCTGAACG AGTGGCGATT GTTGGCGCCG GTCCTGCGGG TTTAGGCTGC
GCGGATATTC TGTCTCGCAA CGGTGTTAAA GCTGTGGTCT TTGATAAATA TCCACAAATT
GGTGGGCTAC TCACCTACGG TATTCCGTCT TTTAAACTCG ACAAAGCCGT TATGGCGACC
CGTCGCAGTG TATTAGAAGG CATGGGCATT GAGTTCAAAC TCGGGGTCAC TGTCGGTAAG
GATATCCCAT TTACTCAACT GCTCGAAGAA TACGATGCCG TCTTCCTCGG TATGGGCACT
TATACTGCCA TGAAAGCGGG TCTTGAGGGT GAAGATGCCC AAGGCGTATA CCAAGCCCTG
CCCTATTTGA TTGGTAACAC CCATCATTTA ATGGGCACTC AAGATGCGCA AACGCCCTAC
CTGAACCTTG AAGGTAAACG TGTGGTGGTA TTAGGCGGTG GTGATACTGC GATGGATTGC
GTGCGCACAG CCGTCAGACA AGGTGCCAGC AGCGTAGTCT GTGCTTACCG CCGGGACGAG
GCCAACATGC CAGGTTCACG TCGTGAAGTG CAAAATGCGC GGGAGGAAGG GGTTAACTTC
CTGTTTAACC GTCAACCTGT GGCGATTAAA ACCCAAGATG GCAAAGTGAT CGGCATTGAA
TGCGTCGAAA CCGCCATGGG CAAGGCCGAT GCAAGCGGTC GTCAACGCGC AGAAGCGATT
GCAGGTAGCG AGCAGTTGCT CGAAGCCGAT GCCATTATTA TCGCCTTTGG TTTTCAACCA
AGCCCTGCAC CTTGGTTTGC CGAACACGGT ATCGAGCTCG ATCAATGGGG CCGAGTCAAA
GCAAATAAGT TAGATGAAAA CCCATTCCAA ACTACCAACC CGAAAGTGTT TGCCGGAGGT
GATATGGTGC GCGGTTCAGA CTTAGTCGTG ACAGCCATTG CCGAAGGTCG CGATGCAGCC
CAAGGTATTC TTAACTACTT AGACTAA
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| Protein sequence | MSNDFQFIEV GRKDPAKHPA AKRATQFIEI YQPFAQPQVA EQADRCLDCG NPYCEWKCPL
HNYIPNWLKL AEQGRIMEAA DLVHETNTLP EICGRVCPQD RLCEGACTLN DDFGAVTIGN
VEKYITDTAI AQGWRPDMSK VTPRPERVAI VGAGPAGLGC ADILSRNGVK AVVFDKYPQI
GGLLTYGIPS FKLDKAVMAT RRSVLEGMGI EFKLGVTVGK DIPFTQLLEE YDAVFLGMGT
YTAMKAGLEG EDAQGVYQAL PYLIGNTHHL MGTQDAQTPY LNLEGKRVVV LGGGDTAMDC
VRTAVRQGAS SVVCAYRRDE ANMPGSRREV QNAREEGVNF LFNRQPVAIK TQDGKVIGIE
CVETAMGKAD ASGRQRAEAI AGSEQLLEAD AIIIAFGFQP SPAPWFAEHG IELDQWGRVK
ANKLDENPFQ TTNPKVFAGG DMVRGSDLVV TAIAEGRDAA QGILNYLD
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