| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1129 |
|---|
| Symbol | |
|---|
| ID | 5081639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 1269573 |
|---|
| End bp | 1270001 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640498260 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001182656 |
|---|
| Protein GI | 146292232 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0336299 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTT TTGGATTATG TGCCCTAGTC GCCTTTTATA GCCTAATGCT GTCGCCCCAA
GCACAAGCAC AGCAACCCAT TATTGTTTCT TATGCAGTTC AACCTGTTAA TCACTTCAAT
CAACAATTAC GCATTGCGCA GGCGCAACAA CAAGATTGGG CAAAAGATCC TAGCAAAATC
AGTAGCCAAT ATGCAGGTAA TAAATTTACC TTAGTGCGCA CTCAATCGCA TAAAGGCAGC
ATTTTAACCT ATCAAGTGAG CGAGTTTTCC AAGCAACATC CACAGATGCT GTTGATTATC
TCCCTAAAAC AAAATGCCAA ACAGTGGCAG GTCAGTTCGG CTCAGTTGGC GTGGAAATGC
AGTGGTGGAC AACACTTTGG TACCGACAGA TGTAATATCG CCGAGCATGA GCTAAACACA
GCGCCTTAA
|
|---|
| Protein sequence | MKFFGLCALV AFYSLMLSPQ AQAQQPIIVS YAVQPVNHFN QQLRIAQAQQ QDWAKDPSKI
SSQYAGNKFT LVRTQSHKGS ILTYQVSEFS KQHPQMLLII SLKQNAKQWQ VSSAQLAWKC
SGGQHFGTDR CNIAEHELNT AP
|
|---|
| |