Gene Sputcn32_1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1111 
Symbol 
ID5081621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1250012 
End bp1250515 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content43% 
IMG OID640498242 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_001182638 
Protein GI146292214 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0715021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGTA TTTACATTAG TTTAGGTAGT AATATTGAGC CCGTTCAGCA TTTGCAGGCA 
GGGTTACAGT CACTCAGAGA ATGCTTTGGT CCACTCAGGC TTTCTTCTAT GTATGAGAGT 
GAAGCGGTTG GGTTTAGTGG CACAAATTTT TTAAATATGG TGGCAAGCGC TGAAACCGAT 
TTGAATATTG CTACGGTAGT TGCGCAGTTT AAGCAAATCG AGCAAAATCA CGGCCGTCTT 
GTTGGTGCAA AGAAGTTCAG CCCAAGAACA TTAGATTTAG ATTTGTTACT TTATGATGAC 
ATAGTATGTC AAATTCCAGT GGTGTTACCC CGGGCCGAGA TAGTTAATAA CGCTTTTGTA 
TTGTGGCCTT TAGCGGAGTT AGCTCCAAAT CTCGTTCACC CCTTAGTCCA CCAAACCTAT 
GCAAAATTGT GGAATGACTA CGACAAAGAT TCACAGCGAC TTTGGCCTGT GACGTTTGAA 
TGGCCCTGTG GGCTGACGTT TTAA
 
Protein sequence
MARIYISLGS NIEPVQHLQA GLQSLRECFG PLRLSSMYES EAVGFSGTNF LNMVASAETD 
LNIATVVAQF KQIEQNHGRL VGAKKFSPRT LDLDLLLYDD IVCQIPVVLP RAEIVNNAFV 
LWPLAELAPN LVHPLVHQTY AKLWNDYDKD SQRLWPVTFE WPCGLTF