| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1105 |
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| Symbol | |
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| ID | 5081615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1244910 |
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| End bp | 1246634 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498236 |
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| Product | DNA primase |
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| Protein accession | YP_001182632 |
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| Protein GI | 146292208 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000782839 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATAC CTCGTGATTT TATCAATGAG CTGATCGCTC GCACCGACAT AGTCGAGCTA
ATCGATCGTA AGGTGCCCTT GAAAAAGGCG GGTAAGAACT ACTCTGCCTG TTGCCCTTTT
CATAGCGAAA AATCACCTTC TTTCACCGTT AGCCGGGATA AACAGTTCTA TCATTGCTTT
GGCTGCGGTG CCCATGGCAA TGCTATCGAT TTTGTAATGG AATACGATCG ACTCGATTTT
ATTGATGCCA TAGAAGATCT GGCTGGACAA CTTGGCTTAG AAGTCCCAAG AGAACAAGGT
ACCGGCAAAC GCCATGATGA TGGTTTAAGC CGAGACTTAT ACCAGTTAAT GGAAGAAGCG
AGCCGCTACT TTCAAAACCA GCTTAGACAA CACCAAGATA AACAAAAAGT TATCGATTAC
CTCGCCTATC GCGGCTTATC CGATGATGTA GTAGAACATT TTGGTATAGG CTTTGCACCC
GATGGCTGGG ACGGTTTATT AGGACGCTAT CGTCAGAATC AAGATGCGCA GGATAAGTTA
CTGACCGCTG GCATGTTAAT AGCCAACGAC AATGGCAAGC GTTACGACCG ATTTCGCGAT
CGTCTTATGT TCCCGATCCG AGATAGGCGT GGGCGAGTTA TTGGTTTTGG TGGCAGAGTT
TTAGGTGATG GCACCCCAAA ATACTTGAAT TCGCCAGAAA CGCCCATATT TCATAAGGGC
AATGAACTCT ATGGTTTATA CGAGCTAAAA CAGCGCCATC GCGATCCAGA TAAAGTGCTG
ATTGTTGAAG GCTATATGGA TGTGGTCGCA TTGGCGCAAT TTGGCGTCGA TTATGCAGTC
GCCTCATTAG GCACTTCGAC CACAGCAGAG CAATTTCAGT TATTACTGCG CAGTGCTAAA
GAAGTGGTCT GCTGTTACGA CGGTGACCGA GCAGGTACAG AAGCCGCATG GCGCGCCTTA
GAGACCGCAT TGCCGCTATT AAAACCGGGG GATCAAGTCC GATTTATGTT CCTGCCTCAG
GCCGAAGATC CTGATTCTAT GGTGCGTAAA ATTGGTAAAG AAGCATTTGA AACCTTAATG
GGCAGTGCAA TAGCACTACC CGAGTTTCTA TTTGATACCT TAGCGACTAA ATATGGTACT
GATAAAAGTA ATTTAGCGAA ACAAGCCTTT ATTTTGATTG AGAAGATTCA AGATACTGTG
CTGCAAAACT TACTGCTTGA GAACTTAGCT CACAAGCTGG GTATGAATAG CTCTGAAGAT
ATGAAAAAAA AGCTAGGTTT TAGTGTCAAA CAAACTAAAA CAGTAGCAAA ACAAGGATTA
AAAGGACGTG GTACACCATT GCGCCTCGCC ATCGCACTGT TAGTACAACA TCCTCTGCTG
GGACTGGGTT TACCCCCACA ACCCGCACTT AACCATCTGC AGATGCCAGG CATTGATTTG
CTGCCACTGC TGTTGGATTT AACTCGAGAG CAAAGGTTAA ACAGCGCACA ACTACTTGAA
CAATTCAGAG ACAATCCCCA CAGTGGGGCG CTCCATAAAT TGGCCCAATG GGACCATCAA
GTGGCGGATG AAAACCTGCT CGAAAAGTTT AAACAAACCC TAGTTTGGTT GAACAATCAA
TATATTGAAC AACGATACCA GGAATTGAGT CTCAAACAGA CTCATACTAA AGAAGAAAAG
ATACAGCTAC AGAAGCTGAT CTCAGTCATG AAAGGATTAA ACTGA
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| Protein sequence | MAIPRDFINE LIARTDIVEL IDRKVPLKKA GKNYSACCPF HSEKSPSFTV SRDKQFYHCF
GCGAHGNAID FVMEYDRLDF IDAIEDLAGQ LGLEVPREQG TGKRHDDGLS RDLYQLMEEA
SRYFQNQLRQ HQDKQKVIDY LAYRGLSDDV VEHFGIGFAP DGWDGLLGRY RQNQDAQDKL
LTAGMLIAND NGKRYDRFRD RLMFPIRDRR GRVIGFGGRV LGDGTPKYLN SPETPIFHKG
NELYGLYELK QRHRDPDKVL IVEGYMDVVA LAQFGVDYAV ASLGTSTTAE QFQLLLRSAK
EVVCCYDGDR AGTEAAWRAL ETALPLLKPG DQVRFMFLPQ AEDPDSMVRK IGKEAFETLM
GSAIALPEFL FDTLATKYGT DKSNLAKQAF ILIEKIQDTV LQNLLLENLA HKLGMNSSED
MKKKLGFSVK QTKTVAKQGL KGRGTPLRLA IALLVQHPLL GLGLPPQPAL NHLQMPGIDL
LPLLLDLTRE QRLNSAQLLE QFRDNPHSGA LHKLAQWDHQ VADENLLEKF KQTLVWLNNQ
YIEQRYQELS LKQTHTKEEK IQLQKLISVM KGLN
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