| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1100 |
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| Symbol | |
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| ID | 5081708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1235460 |
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| End bp | 1236737 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640498230 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001182627 |
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| Protein GI | 146292203 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.840531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAA CCAATGATTC ATTGATGGCA CGTCGCCAAG CCGCGGTTGC GGGTGGTGTC
GGGCAAATAC ACCCTATTTT TACTGCGCGC GCCGAAAATG CGACCGTGTG GGATGTTGAA
GGTCGCGAGT TTATCGATTT TGCGGGCGGC ATTGCCGTGC TCAATACGGG TCATCTTCAC
CCTAAGGTTA AGGCGGCGGT TGCTGCTCAA CTCGATAATT TCTCCCATAC CTGTTTTATG
GTGCTCGGTT ACGAGAGCTA TATCAAAGTA TGTGAAAAAC TCAATCAACT GGTACCTGGG
GATTTTGCTA AGAAGACGGC ATTATTCACC AGCGGCTCAG AAGCGGTTGA AAACGCGGTT
AAAGTGGCTC GCGCCTACAC TAAACGTGCT GGCGTGATTG CGTTCACCTC TGGTTACCAT
GGTCGCACTA TCGCAGCCTT GGCATTGACC GGAAAAGTCG CGCCTTACAG TAAAGGTATG
GGGCTGATGT CGGCGAATGT GTTCCGCGCT GAGTTCCCGT GCGAAATGCA CGGCGTGTCC
GATGACGATG CTATGGCCTC GATTGAACGT ATCTTTAAAA ATGATGCCGA GCCAAGTGAT
ATCGCCGCAA TTATTCTCGA ACCTGTGCAG GGTGAGGGCG GTTTTTACGC CGCATCGCCC
GCTTTTATGC AGCGCCTGCG GGCACTATGC GACCGTGAAG GCATAATGCT TATCGCCGAT
GAAGTGCAAA CGGGGGCGGG TCGTACTGGC ACTTTCTTCG CCATGGAGCA AATGGGTGTT
GCTGCAGATA TCACGACCTT TGCTAAATCC ATAGCGGGTG GTTTCCCACT TTCAGGCATT
ACTGGTCGTG CCGAGGTGAT GGATGCAGTT GGCCCCGGAG GCTTAGGTGG CACCTATGGT
GGCAATCCGT TAGCCTGCGC CGCAGCACTT GCTGTTATTG AAGTGTTCGA AGAAGAAAAG
CTGTTAGACC GCGCCAATGC TATAGGCGAG CGTATTAAGT CAGCACTGAA TATGATGCAG
GTCGAACATG CGCAAATCGC CGATGTGCGT GGTTTAGGCG CTATGATCGC CATCGAACTG
ATGGAAGAGG GTAAACCCGC GCCAAACGCT TGTGCAAAAG TGTTGAGTGA TGCCCGTGAC
CGTGGATTGA TTTTATTGTC CTGCGGCACT TACGGTAATG TGCTGCGTAT TTTGGTGCCA
TTAACGGCGC CGGATGCACA AATTGATGCG GGTCTTGGTA TTCTTAAAGC CAGTTTCGAT
GCTGTACTGA AAAGCTAA
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| Protein sequence | MTTTNDSLMA RRQAAVAGGV GQIHPIFTAR AENATVWDVE GREFIDFAGG IAVLNTGHLH
PKVKAAVAAQ LDNFSHTCFM VLGYESYIKV CEKLNQLVPG DFAKKTALFT SGSEAVENAV
KVARAYTKRA GVIAFTSGYH GRTIAALALT GKVAPYSKGM GLMSANVFRA EFPCEMHGVS
DDDAMASIER IFKNDAEPSD IAAIILEPVQ GEGGFYAASP AFMQRLRALC DREGIMLIAD
EVQTGAGRTG TFFAMEQMGV AADITTFAKS IAGGFPLSGI TGRAEVMDAV GPGGLGGTYG
GNPLACAAAL AVIEVFEEEK LLDRANAIGE RIKSALNMMQ VEHAQIADVR GLGAMIAIEL
MEEGKPAPNA CAKVLSDARD RGLILLSCGT YGNVLRILVP LTAPDAQIDA GLGILKASFD
AVLKS
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