| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1095 |
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| Symbol | |
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| ID | 5081703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1229534 |
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| End bp | 1230670 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498225 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001182622 |
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| Protein GI | 146292198 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.703893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGCA CCTCGGGCGT CACCAATAAA CCCACAACAA AGACGCAAGA ACATGTACTG
CTCAAGATTG AGCGGGTCAG TAAATTATTC GACGATGTAC GTGCAGTTGA TGATGTGTCA
TTGACGATCA ATAAAGGTGA AATTTTCGCC TTACTTGGTG GTTCTGGATC TGGGAAATCG
ACTTTACTGC GTATGCTCGC AGGCTTTGAA AAACCGACAT CGGGCCGCAT TTATCTTGAT
GGTGAAGATA TCACCGACTT ACCGCCCTAC GAACGTCCTA TCAATATGAT GTTTCAATCC
TATGCTTTAT TTCCCCATAT GACGGTGGCG CAAAATATTG CTTTTGGTTT GAAGCAAGAC
AAGCTACCTA AAGCTGAAAT TGAGCAGCGC GTGCAAGAGA TGCTTAAACT TGTGCACATG
GAACAATATG GTAAGCGTAA ACCTCACCAG TTATCTGGCG GTCAGCGTCA GCGTGTTGCG
CTGGCACGCT CGCTTGCTAA GCGTCCTAAA TTATTGCTGC TTGATGAACC TATGGGCGCA
TTGGATAAAA AACTGCGTAC CCAGATGCAA CTCGAAGTGG TTGAAATTCT TGAGCGTGTT
GGTGTGACTT GCGTAATGGT GACTCACGAT CAAGAAGAAG CGATGACCAT GGCCGGACGG
ATTGCCATTA TGAGTGATGG CTGGATTGCT CAAACAGGCT CACCGATGGA CATTTACGAA
AGCCCGAACA GTCGTATGAT TGCCGAGTTT ATTGGTTCAG TGAATTTGTT TGGTGGTGAA
ATTGAAGTGG ATGAAGTTGA CCATTTGATC ATTAAACCCA ATGAATTAGC TCAATCTTTT
TATGTCGGCT ACGGAGTAAC GACCAGCCTT GAAGATAAGC ATGTATGGTT AGCGGTACGC
CCTGAAAAGA CGATAATTAG CCGTGAGCAA CCCGAAGGTG AATATAATTG GGCGAAAGGT
ATTGTGCATG ATATCGCTTA CTTAGGTGGT ATATCAGTGT ATTACATTCG CTTAGAGAAT
GGCCAAATTG TACAGTGTAG TATGACTAAC CGTGAACGCC GCGCCGATCA TGCTACTTGG
GATGATGAAG TGTTTATCAG TTGGGAGGAC ACCAGTGGCG TGGTGTTGAG ATCATGA
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| Protein sequence | MASTSGVTNK PTTKTQEHVL LKIERVSKLF DDVRAVDDVS LTINKGEIFA LLGGSGSGKS
TLLRMLAGFE KPTSGRIYLD GEDITDLPPY ERPINMMFQS YALFPHMTVA QNIAFGLKQD
KLPKAEIEQR VQEMLKLVHM EQYGKRKPHQ LSGGQRQRVA LARSLAKRPK LLLLDEPMGA
LDKKLRTQMQ LEVVEILERV GVTCVMVTHD QEEAMTMAGR IAIMSDGWIA QTGSPMDIYE
SPNSRMIAEF IGSVNLFGGE IEVDEVDHLI IKPNELAQSF YVGYGVTTSL EDKHVWLAVR
PEKTIISREQ PEGEYNWAKG IVHDIAYLGG ISVYYIRLEN GQIVQCSMTN RERRADHATW
DDEVFISWED TSGVVLRS
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