| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1094 |
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| Symbol | |
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| ID | 5081702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1228259 |
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| End bp | 1229359 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640498224 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001182621 |
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| Protein GI | 146292197 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.799805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTAT TTAATAAGAT GACCACCTTG GCTTTAGTGA CCACAGGCGT GCTAGCAAGT
GTTACTGTTC AAGCTGAGGA AGTGGTTCGC GTATATAACT GGTCTGATTA TATCGCGGAA
GATACCTTAG AAAACTTCAA GAAAGAAACA GGCATTCGGG TTATTTACGA TGTATTTGAT
AGTAACGAGG TGCTAGAGGC TAAGTTATTG TCTGGCCGTA GCGGTTATGA CATCGTCGTT
CCTTCCAATC ACTTTTTAGC GAAACAAATT AAAGCAGGTG CTTTTAAGCC ATTAGATCGT
TCTAAATTGA GTAACTTTAA AAATCTCAAC GCGGAGCATA TGAAACAGCT TGAAAAGGCC
GATCCTGGTA ACCAGTACGC AGTGCCCTAT TTATGGGGAA CTAATGGTAT AGGTTACAAT
ATCGACAAAG TGAAAGCGGC CGTGGGGGAA GATGCGCCAT TTGATTCTAT GGAACTGATC
TTCAACCCTA AATATGCCGA AAAAATCGCT AAGTGTGGCT TTGCTATGTT GGATTCTGCC
GACGATATGG TGCCACAGGC CATGATTTAT TTAGGCTTAG ATCCCAATAG TGCTAAAGCT
GAAGATTATG AAAAAGCGGG TGAGTTGCTG GAAAAAATTC GCCCTTATGT AACATACTTC
CATTCATCTC GTTATATTTC TGACCTTGCC AACGGGGATA TCTGTGTTGC TTATGGTTTC
TCTGGAGATG TATTCCAAGC GGCAGCACGT GCCGATGAGG CGGGTAATGG CAATAAGATC
GGTTACTCCA TTCCAAAAGA AGGCGCAAAC CTTTGGTTTG ATATGTTAGC TATCCCTGCC
GATGCTAAAA ATATTGAAAA TGCGCATAAG TTTATCAACT ATTTATTACG TCCAGAAGTG
ATTGCGCCTA TTTCTAACTA TGTGGCGTAT GCTAATCCTA ATGACCCTGC TCAACCTTTG
GTTGATGAAG CTGTTCGCAC CGATCCTGCG ATTTATCCAT CTAAAGAAGT GTTAGATAAA
TTGTATATCG GCGAAGTCCG TCCTTTAAAA ATCCAACGTG TATTAACCCG CGTTTGGACC
AAAGTGAAAT CAGGTAAATA A
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| Protein sequence | MKLFNKMTTL ALVTTGVLAS VTVQAEEVVR VYNWSDYIAE DTLENFKKET GIRVIYDVFD
SNEVLEAKLL SGRSGYDIVV PSNHFLAKQI KAGAFKPLDR SKLSNFKNLN AEHMKQLEKA
DPGNQYAVPY LWGTNGIGYN IDKVKAAVGE DAPFDSMELI FNPKYAEKIA KCGFAMLDSA
DDMVPQAMIY LGLDPNSAKA EDYEKAGELL EKIRPYVTYF HSSRYISDLA NGDICVAYGF
SGDVFQAAAR ADEAGNGNKI GYSIPKEGAN LWFDMLAIPA DAKNIENAHK FINYLLRPEV
IAPISNYVAY ANPNDPAQPL VDEAVRTDPA IYPSKEVLDK LYIGEVRPLK IQRVLTRVWT
KVKSGK
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