| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1092 |
|---|
| Symbol | |
|---|
| ID | 5081700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1225519 |
|---|
| End bp | 1226280 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640498222 |
|---|
| Product | peptidase C26 |
|---|
| Protein accession | YP_001182619 |
|---|
| Protein GI | 146292195 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2071] Predicted glutamine amidotransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.337501 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCAG AGTTACCCCT CATTGGTGTT ATTGCGTGTA ATCAACAATT GGGTTCACAT
CCGTTTAATA TTGTTGGTGA AAAATATCTT TTAGGTGTTG TTGATGGTGC GAAAGGCTGG
CCTTTGGTGA TCCCATCACT CGGGCATGAT TCACCTATTG ACAGTATCTT GGCACGGCTT
GATGGCATTT TGTTTACGGG GTCTCCTTCT AATGTTGAGC CACGCCATTA TGCAGGTCAA
CCGAGTGAGA CTGGTACTCA CCATGATCCC AAACGTGACG CCACTACCTT GCCATTAATC
CACGCTGCTA TTGCGGCAGG AGTGCCTGTA CTCGGAATAT GTCGTGGTTT TCAAGAAATG
AATGTGGCCT TTGGTGGCAG CTTGCATCAA AAGTTATATG AAGTTGCTGG TTTGATCGAA
CATAGAGAAA ATGAAAATGC CGCTTTAGAG GTGCAATATG GGCCGTCACA CAGTATTACT
GTTGAGCCTG GGGGGGTCAT TTACGAGGCT TGGGGCCGTA ACTCTGCAGA GGTTAACTCT
GTTCATACTC AAGGCGTGGC GCGTTTGGGT GTTGGGTTAC GGCCAGAAGC TTATGCTCCA
GATGGATTAG TGGAGGCCTT CTCCGTAATC GATACCAAAG AATTTGCCCT TGGTGTGCAG
TGGCATCCAG AGTGGAAGGT GGCTGAAAAT CCATTTTACC TCTCTATTTT CAATGCGTTT
GGTGATGCCT GCCGACGTAG GGCTAAAACT CGAGTGAAAT AA
|
|---|
| Protein sequence | MSAELPLIGV IACNQQLGSH PFNIVGEKYL LGVVDGAKGW PLVIPSLGHD SPIDSILARL
DGILFTGSPS NVEPRHYAGQ PSETGTHHDP KRDATTLPLI HAAIAAGVPV LGICRGFQEM
NVAFGGSLHQ KLYEVAGLIE HRENENAALE VQYGPSHSIT VEPGGVIYEA WGRNSAEVNS
VHTQGVARLG VGLRPEAYAP DGLVEAFSVI DTKEFALGVQ WHPEWKVAEN PFYLSIFNAF
GDACRRRAKT RVK
|
|---|
| |