Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1091 |
Symbol | |
ID | 5081699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1224563 |
End bp | 1225111 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640498221 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001182618 |
Protein GI | 146292194 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.158888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATATTG GTGCCAGTCT CAAAACTGTT CGAAAAATGA AAGGCTTATC TCAGCGGGAA TTAGCTAAAC GTGCTGGTGT GACTAACAGT ACGATTTCAA TGATCGAAAA AAACAGTGTT AGCCCATCTG TCAGTTCTTT AAAAAAAGTA TTGTCGGGTA TCCCGATGTC TTTAGTGGAC TTTTTCTCTA TTGAAGCCAC ATCAGAGTGT GAACAAAAAG TGGTATATCG ATCCGATGAA CTGCTTGATA TAGGCACAGG GCCGCTAGAA TTTAAGTTAA TTGGCCGTGA TTATCCAAAC CGGGCTATGT CTGTAATGAG TGAAACTTAT CCACCGGGTT CAGATACCGG TGAAGAGATG TTAAAACATC AAGGCGAAGA GGCCGCAATG GTGATAGAAG GTAAATTCGA ACTCACTGTA GGGGATGAAG TGTATATTTT GGAAACGGGT GACAGTTATT ATTTTAACAG TGAGCTACCC CATCGATTCC GTAATCCTTT CGATGAGCCT TGCCGACTCA TTAGTGCAAC GACACCTGCA AACTTCTAA
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Protein sequence | MDIGASLKTV RKMKGLSQRE LAKRAGVTNS TISMIEKNSV SPSVSSLKKV LSGIPMSLVD FFSIEATSEC EQKVVYRSDE LLDIGTGPLE FKLIGRDYPN RAMSVMSETY PPGSDTGEEM LKHQGEEAAM VIEGKFELTV GDEVYILETG DSYYFNSELP HRFRNPFDEP CRLISATTPA NF
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