| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1079 |
|---|
| Symbol | |
|---|
| ID | 5081687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1209895 |
|---|
| End bp | 1211049 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640498209 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001182606 |
|---|
| Protein GI | 146292182 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4299] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0378973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACACTA CACAGACAAG CGCAATTGTG CCGGGAAAAG CGAATAAACC TAGGTTGATG
TCTCTGGATG CACTGCGCGG CTTCGATATG TTCTGGATTT TGGGCGGTGA GGCCCTGTTT
GGGGGCTTGC TTATTTTAAC GGGCTGGGCA GGTTGGCAAT GGGGCGATGA ACAAATGCAC
CATAGCCAAT GGCATGGTTT TCACTTCTAC GATTTGATTT TTCCGCTGTT TATTTTCCTC
TCTGGTGTGG CCTTAGGGTT ATCTCCCAAG CGTTTAGATA AATTACCTAT GAGTGAGCGA
TTACCAGTGT ATCGGCATGG GATTAAACGA CTCTTTTTAT TGCTGCTACT GGGCATTTTA
TATAATCACG GTTGGGGTAC GGGCGCGCCT GCCGATCCTG AAAAAATTCG CTATGCCAGT
GTGTTAGGTC GAATCGCCTT TGCATGGTTC TTTGCCGCAT TACTGGTGTG GCACACGAGT
CTACGAACGC AAGTTATTGT CGCCTTGGGC ATTTTGCTCG GTTATGGCGC AATGCAACTT
TGGTTGCCTT TCCCCAGTGG ACAGGCGGGT GTGTTCTCGC CAACGCAATC CATCAATGCC
TATGTCGATT CGATTTTATT GCCTGGCGTC AGCTATCAGG GACGCACACC CGATCCTCAA
GGTTTGTTAT CGACCATTCC CGCCGTAGTC AATGCGTTAG CGGGTGTGTT TGTCGGGTAC
TTTATTGTTA AATCCCATCC TCAAGGTGAG TGGGTCAAAG TGGGATTACT CGCCACTGCA
GGTGGCGCTT GGTTAGCCTT AGGTTGGCTG TTGGATGGTG TTATTCCTGT CAATAAAGAG
CTGTGGACCA GTTCATTTGT GCTGGTGACG TCGGGCTGGA GCATGATCCT GCTGGCGCTA
TTCTATGCCT TAGTCGATGT GCTTAAGTGG CAAAAAGTCG CATTTTTCTT CGTGGTGATA
GGCACGAACG CCATCATTAT TTATTTAGCG TCGAGCATAG TAGATTGGAA ATATATCGCC
CAAAGTGTGT TTGGCGGGCT AGTAGCGGCT TTACCTCAAA GCGCTCAAGC GTTAGCTGCG
GTTATCAGCT TACTTGCGGT GCAGTGGCTG GTTTTATATT GGATGTATCG GCGCAAGATT
TTTTTCAGGA TTTAG
|
|---|
| Protein sequence | MDTTQTSAIV PGKANKPRLM SLDALRGFDM FWILGGEALF GGLLILTGWA GWQWGDEQMH
HSQWHGFHFY DLIFPLFIFL SGVALGLSPK RLDKLPMSER LPVYRHGIKR LFLLLLLGIL
YNHGWGTGAP ADPEKIRYAS VLGRIAFAWF FAALLVWHTS LRTQVIVALG ILLGYGAMQL
WLPFPSGQAG VFSPTQSINA YVDSILLPGV SYQGRTPDPQ GLLSTIPAVV NALAGVFVGY
FIVKSHPQGE WVKVGLLATA GGAWLALGWL LDGVIPVNKE LWTSSFVLVT SGWSMILLAL
FYALVDVLKW QKVAFFFVVI GTNAIIIYLA SSIVDWKYIA QSVFGGLVAA LPQSAQALAA
VISLLAVQWL VLYWMYRRKI FFRI
|
|---|
| |