Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1067 |
Symbol | |
ID | 5081675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1195180 |
End bp | 1195572 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640498197 |
Product | methylation site containing protein |
Protein accession | YP_001182594 |
Protein GI | 146292170 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4968] Tfp pilus assembly protein PilE |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCG CCAGAGGTTT TACGCTAATA GAGTTAATGA TTACCGTTGC GATAGTCGGA ATTCTAGCGG CGATTGCTTA TCCATCTTAT ATTGAATACG TTACTAAAAG TGGCCGTTCT GAAGGCGTTG CAGCAGTGAT GCGAGTTGCT AACTTACAGG AACAGTATTA CTTAGATAAT AAGGCTTATG CTACAGATAT GACTAAGTTA GGGTTATCTG CAAGCCCGTT CATCACTGAA CATGGACATT ATAGTCTCTC TTCTGAAGGG ACGAGTAGTT TTAAAATTAC GGCGACTGCG AAGGGAAGTC AGGCGAGTCG GGATTCTGTT TGTGCAACTA TCACATTAAC AGATATCGGT GTTAAAGGGC CATCTGAGGA GTGTTGGAAA TGA
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Protein sequence | MKIARGFTLI ELMITVAIVG ILAAIAYPSY IEYVTKSGRS EGVAAVMRVA NLQEQYYLDN KAYATDMTKL GLSASPFITE HGHYSLSSEG TSSFKITATA KGSQASRDSV CATITLTDIG VKGPSEECWK
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