| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1066 |
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| Symbol | |
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| ID | 5081674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1191676 |
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| End bp | 1195173 |
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| Gene Length | 3498 bp |
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| Protein Length | 1165 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640498196 |
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| Product | type IV pilin biogenesis protein, putative |
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| Protein accession | YP_001182593 |
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| Protein GI | 146292169 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAATA AGTGCTTAAT AGGTCTTTTG ACTGCATTAA TTATTATGTT AGATGCAGTA
TATGCCGATG ATACTGAACT ATATCTTATT GATTCTACAG TCCGTTCAGG TAAGCGACCA
CAAGTGTTAT TTATTTTCGA TAACTCTGGC AGCATGTCAA CAATTGAAGA GAATGCCGTG
ACGTCTTACT GTTCTGAAGC AGGTAAAGCT GCGGGGACTT GTAGTTATCC TACTGGATTT
GATAATTTCC TCTCGGGTTA TTCTGGTTAT ATCAATAATA AAGGGACCTA TTGGAATGCG
GGTGGTATAG ATAATACTAA TAATATGCCA ACACCGGATA AGCCTAATGA TGCTCGACGC
TTCTATTTAG ATAATAATAA CTGTAATACA GCAGCAAAAG CATTAGTGGA TAAAGGACGT
TATACAGGTT ATTTACGAGA GTTTAGCAGC AACCGAAATA CTTGGAATAA TCTAGCGGAT
AATAATGGAT TTAATCAGAA TGATATAGTG GATTGTTATG AAGATATTCT TAATGGAGAC
CCTGTTAATC CAGGTAAACT AAAAGGTGTA GCTTTTAAAA ATGGATATCC AATAAATAAT
AAATCAATGT ATACCACAGG GAGTGGTGAA GCAGATCGTT TGTCGAGTTT GAGTAATACT
CAATTTGGTT CTGGTCAGCC TGTTACCTTA TATAGTGCAC ATTATCTTGT TTGGCATAAA
TGGGCGACGA CAACAGAAGA AGGTAAAAGT AGTGGTGGTG TCGGTACTCG GCTTGATGTT
GCCAAAAGTG CGTTGATTTC TGCACTAGAA TCGCTAGCAA TTCCTATTGA TGCTGGACTT
GCAATTTTTA ATTTAAATTA CCCTAATGAG GGTGATGCTG ACGGTGGTCG AATCGTTTAT
GATCTAACTG AGATGAACAG CATTAATAAA GTGAATCTGA CTTCACTTAT TAAAAATATG
CCAGCAAAAA CTAATACACC ACTTTGCGAA ACACTTTATG AAGCATATCA GTATTTTAGT
GGTGGGCAAG TGACTTTTGG CAATAAAGAT AAAAATGGCA CAGGGAATAA TAAAATTGAT
GGATATACTC CAAATAATCC TCCAAGTATA TTAACCTCTG GGAGTTATAC GACGCCATTT
AAAAAATGTC CCGATACCGC TTATATTATC TATATTACCG ATGGCGCGCC AACATTAGAT
AAATCGGCAG ATACGCTTAT TAATGGTTTA GTTGCAAACG CCAAAAACCA AGCTGCTAAC
TATGCTGCAT TCTCGTTTAC TAATGCTGGA AATAAGACAG AAACAAGCTA CATGCCTGCA
CTCGCTGCTT ATATGTATAA CAATGATATT GTTATTGGAA ATAAAGACTC TTTAGGTATT
GATAATAAAC AAAATATACG GGTGTTTACT ATCGGTTTTT CTGATGGTGC AGATGAGGCC
GCAGCTCTGT TAGAAGAGAC TGCTTTTAGG GGAGGGAATC CTCGTGGAAG TAATAATATC
TCTAAGGGAT ATTATGTCGC TAAAAATGGG CTCGATTTAG TTTCAGCGTT AGAAGATGCT
TTGAAATCAA GTTTGACAAT AGATTCATCT TTTACCTCGC CAAGTATTGC GAGTAATAAC
TTTGATAAGA CTCAAACCTA TAATTCAGCA TATTATGCAA TGTTTTTACC CGGCAATGGA
CCTCGATGGA GTGGTAATCT TAAAAAACTA AAAGTCAATG CGGCAGGCGA AATTGTAGGC
CCTGGTGGAA ATAATAAAGC AATTGATTCA AATGGTAATA TTGCAAATGA TGTTTGCACA
TATTGGAATA CTTGCTCCGA ATCAAATGAT GGTAATAAAG TTCTTTTTGG AGGAGTCTTA
CCTTCGTTGA GAGCTAAGCT TAAAAATCGA ACTATTTATA CCAATAATGG TTCAAGTTTG
ATTAATTTTT CCAGTTCTTC TTTTATCTCA GGGCATTCTC AGGCGGATTT TGATTGGTTA
TATGGTGTGG ATGTTGATGA TGAAAATAAC AACAACAATA CATCAGACGC TAGAGAAGAC
GTTATGGGCG ATCCACTTCA CTCTAAACCC TTAGCTATCA ATTATGGTAG TACAACAAAT
TTGGATGTAC GGATTCTTGT GGGCACTAAC CAAGGGTTAG TGCATATGTT TAAGGATTCA
GATACAGGTA ATAATGATTA TAGTGTGGGT TCTGTTGAGG AGTCATGGGC ATTTATTCCT
AATGAACTTT GGGGCAATAT TCCGCTATTA AGGCAAAATC CAGCGACCGG GGTGCATTCA
ATATATGGTA TGGATCTATC ACCTGTGGCA TACACTGAAA GCGATGCAAC AGGTAAGCTC
ACTAAGGCTT GGGTGTATTT AGGTATGCGA AGTGGCGGTG CATCCTACTA CGCTTTAGAT
ATTACAGCCG TTGATGCCCC AACATTTAAA TGGATGATTA ACTCGGATAG CACTTCCTTT
GAGGATCTAG GCCAAACATG GTCTGAACCT GTAGTGACTT ACATTCCCGG AGTCAAGGAC
CCTATATTGA TATTCGGTGG GGGAATGGCA TCATCTGATG GTTCTGGTGC TGCAGTTTAT
ATTGTTAATG CGGATACTGG TGCATTTATC ACTAAATTTA CTGCTGACGA TATGGGGAGT
GTTGTTACCA AAGTGGCAGT GCTAGACAGT GACAACGATG GTGCAACGGA TCGTATATAT
GCCAGTGATA TTACGGGTAA TGTATGGCGT ATTGATTTGG CTAGCACGAC TCAAAGTGAA
TGGACTATTT TTAAATTTGC TTCCATTGCG GGTGAGTCCC CTAACAATCG AATGTTCTTT
GCTGAGCCTG TCGTCGCACA AACTCAATTT AATAATGTTC ATTCAGAGAG TGGTGTCTTA
AGTTATCAAA AAATACCTTA TGATGCGGTC ACTATAGGAA CAGGAAACCG CAACCATCCT
TTAGATATGA CGACAAACGA TATGTTTTAT GTCTTTCAAG ATAGAAATGT TGTCACGCAA
ATTTTTGAAG AAAAACCTTC AGTACTAACC ATTAACGATC TTTACGACGT TAGCAGTAGT
TCCCCAGTTA GTGAGTCAGA TAATGTTGCT TTTGGTAAAA CGAGGGGCTG GTATTACGAT
TTTACTGCCA ACGGAGAAAA AAGCTTATCT GCTTCACTTA TTTTTGATGG CAAAGTTTAT
TTTACATCCT TTGTGCCCCC CACAAATCAA GCGGTAGATT TAGATGCCGG CGTTTGTGGT
TTTTCTGGTC AAGGGCGATT ATATGTATTT GATTTACATA AGGGCACTCG TACCTATAAT
CAGGTTTATT ATGAGGTTGG TGAGCGGGTA CCTGATACAC CTCAAATCGT CATTCCAAAA
CCTGAGGACG GTGAGGAGGT TAAAGCATAT ATCATCGGTG TTGGTAAAGG TGAGTGTGAA
AATGGTGAAT GTAAAGGTAC GATTGAGTTA GGTAGCGGCT TGGGCGCTAA TAAAATTTAC
TACCATATTA ATGAGTGA
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| Protein sequence | MLNKCLIGLL TALIIMLDAV YADDTELYLI DSTVRSGKRP QVLFIFDNSG SMSTIEENAV
TSYCSEAGKA AGTCSYPTGF DNFLSGYSGY INNKGTYWNA GGIDNTNNMP TPDKPNDARR
FYLDNNNCNT AAKALVDKGR YTGYLREFSS NRNTWNNLAD NNGFNQNDIV DCYEDILNGD
PVNPGKLKGV AFKNGYPINN KSMYTTGSGE ADRLSSLSNT QFGSGQPVTL YSAHYLVWHK
WATTTEEGKS SGGVGTRLDV AKSALISALE SLAIPIDAGL AIFNLNYPNE GDADGGRIVY
DLTEMNSINK VNLTSLIKNM PAKTNTPLCE TLYEAYQYFS GGQVTFGNKD KNGTGNNKID
GYTPNNPPSI LTSGSYTTPF KKCPDTAYII YITDGAPTLD KSADTLINGL VANAKNQAAN
YAAFSFTNAG NKTETSYMPA LAAYMYNNDI VIGNKDSLGI DNKQNIRVFT IGFSDGADEA
AALLEETAFR GGNPRGSNNI SKGYYVAKNG LDLVSALEDA LKSSLTIDSS FTSPSIASNN
FDKTQTYNSA YYAMFLPGNG PRWSGNLKKL KVNAAGEIVG PGGNNKAIDS NGNIANDVCT
YWNTCSESND GNKVLFGGVL PSLRAKLKNR TIYTNNGSSL INFSSSSFIS GHSQADFDWL
YGVDVDDENN NNNTSDARED VMGDPLHSKP LAINYGSTTN LDVRILVGTN QGLVHMFKDS
DTGNNDYSVG SVEESWAFIP NELWGNIPLL RQNPATGVHS IYGMDLSPVA YTESDATGKL
TKAWVYLGMR SGGASYYALD ITAVDAPTFK WMINSDSTSF EDLGQTWSEP VVTYIPGVKD
PILIFGGGMA SSDGSGAAVY IVNADTGAFI TKFTADDMGS VVTKVAVLDS DNDGATDRIY
ASDITGNVWR IDLASTTQSE WTIFKFASIA GESPNNRMFF AEPVVAQTQF NNVHSESGVL
SYQKIPYDAV TIGTGNRNHP LDMTTNDMFY VFQDRNVVTQ IFEEKPSVLT INDLYDVSSS
SPVSESDNVA FGKTRGWYYD FTANGEKSLS ASLIFDGKVY FTSFVPPTNQ AVDLDAGVCG
FSGQGRLYVF DLHKGTRTYN QVYYEVGERV PDTPQIVIPK PEDGEEVKAY IIGVGKGECE
NGECKGTIEL GSGLGANKIY YHINE
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