| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1064 |
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| Symbol | |
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| ID | 5081672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1190241 |
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| End bp | 1191224 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640498194 |
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| Product | prepilin-type cleavage/methylation-like protein |
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| Protein accession | YP_001182591 |
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| Protein GI | 146292167 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATAA AACGCTTTAA TATAGCGATT ATTCATTATC AAACTGGGCT GTCATTGGTT
GAGCTTATGG TCGCTATGGT TATTGGCCTA TTTTTAACCG CGGGCGTATT TACCATGTTT
AGTATGTCAT CTTCGAATGT GACAACCACA AGCCAATTTA ATCAATTACA GGAAAATGGC
CGCATAGCTT TAGCAATTCT TGAGCGTGAT TTGAGCCAAC TTGGTTTTAT GGGTGATATG
ACGGGTACTG ACTTTGTTCT TGGTTCCAAC ACCCAAGTGA ATATTGCTGC TGTAGCGAAT
GATTGTGTTG GTGATGGTTT GAATAATGCT ACCTTGCCAA ATAATACACC TGCACATTTT
CGACGCTTGT GGGGCTATGA GCAGGGCGTT GGTGCATCCC CTTTCGATTG CCTTAACAAC
GTCAATAACA ATACCGATGT AGTACAAATT AAAAGGTTAA TTGGTCCATC CCTTGCTGCT
CCTTCTGGTA ATAATATTTT TGTTGTAGCT AATGCTAGCC AAGCGATTTT TTTTACAGGT
AACTCTTCTC CCACTATGAC GAATGGGCGG ATATGGGAGT ACCAGCATCA TGTGTACTTT
ATTAGTAATG ATACCGCTAA AACTCCAGTG TTACGTCGTA AAACCTTGAC TAATTCTGGA
ATGAATAACG ACGAGCAATT GGTTGAGGGA ATTGAAAATC TCCGTATTCT CTATGGTTTT
GATAATGATG GAGATGATAC GCCAGATAGT TTTCTTTCTG CCGAGAATGT TAGTAATTTA
ATGTGGGAAA ATCAGACTTT TCAGCGACTG GTTGCCTTGA AATTATTTGT ATTAGTGCGA
TCGGTACAAG TTGATGCTAG CTACACTAAC GAAACTCAGT ATCAATTAGG TGACAAAACG
ATTGAAGCAC CTAAGGATAG TTATCGGCGT AAGGTGATGT CTACGACAGT TGTATTGGAA
AACCCAGTAT TGATCCGTAG TTAA
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| Protein sequence | MAIKRFNIAI IHYQTGLSLV ELMVAMVIGL FLTAGVFTMF SMSSSNVTTT SQFNQLQENG
RIALAILERD LSQLGFMGDM TGTDFVLGSN TQVNIAAVAN DCVGDGLNNA TLPNNTPAHF
RRLWGYEQGV GASPFDCLNN VNNNTDVVQI KRLIGPSLAA PSGNNIFVVA NASQAIFFTG
NSSPTMTNGR IWEYQHHVYF ISNDTAKTPV LRRKTLTNSG MNNDEQLVEG IENLRILYGF
DNDGDDTPDS FLSAENVSNL MWENQTFQRL VALKLFVLVR SVQVDASYTN ETQYQLGDKT
IEAPKDSYRR KVMSTTVVLE NPVLIRS
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