| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1062 |
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| Symbol | ispH |
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| ID | 5081670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1188516 |
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| End bp | 1189472 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498192 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001182589 |
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| Protein GI | 146292165 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCG ATCCTACAAG CCCAAGCTTG AATATTTTAC TCGCCAATCC ACGTGGTTTT
TGTGCTGGAG TGGATCGTGC TATTAGTATT GTCGAACGGG CGTTGGAATT GTTTTCACCG
CCAATCTATG TTCGCCATGA AGTTGTGCAT AACCGCTATG TCGTGCAAAA TCTGAAAGAT
CGTGGTGCGG TTTTTGTCGA AGAGCTTGAT CAAGTGCCTG ATAATAATAT CGTTATTTTC
AGTGCCCACG GTGTATCTCA AGCGGTGAGA CTAGAAGCTA AGGCGCGAGG GCTGAGAGTC
TTTGATGCAA CGTGTCCCTT AGTCACTAAA GTACATCTTC AGGTGACGCG TGCCAGCCGC
AAAGGTATTG AGTGCATCCT GATTGGCCAT GAAGGGCACC CTGAGGTCGA AGGTACTATG
GGTCAATACG ATAATCCTAA TGGTGGAGTT TATCTGATTG AATCGCCAGC CGATGTTGAA
GCTTTGGAAG TGCGTGACCC CAATAATCTC TGCTTCGTGA CACAAACTAC TTTGTCTGTA
GATGATACTT TGGACATTAT TGTTGCCTTA CAAAAAAGGT TTCCCTCTAT TGAAGGTCCG
CGAAAAGACG ATATCTGTTA TGCAACGCAG AATCGTCAAG ATGCGGTACG TAATTTGTCT
GCAGACGTTG ATTTGTTGAT TGTTGTTGGC TCAAAGAACA GCTCTAACTC TAATCGTTTA
CGCGAGCTAG CATTGAAAAC AGGAACCCAG TCTTATCTGG TGGACACCGC GGATGATGTT
GAGTCTAGTT GGTTTGATAA TGTTACACGT GTAGCAGTGA CTGCTGGCGC ATCTGCTCCC
GAGGTCTTAG TTCAACAAGT TGTTCAAGCT ATCGCGACAC TCGCCCCTAG TGTGGTCACA
GAGGTTGAAG GCCGTAAAGA AGATACAGTT TTTGCGGTAC CTGCTGAATT ACGGTAA
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| Protein sequence | MKLDPTSPSL NILLANPRGF CAGVDRAISI VERALELFSP PIYVRHEVVH NRYVVQNLKD
RGAVFVEELD QVPDNNIVIF SAHGVSQAVR LEAKARGLRV FDATCPLVTK VHLQVTRASR
KGIECILIGH EGHPEVEGTM GQYDNPNGGV YLIESPADVE ALEVRDPNNL CFVTQTTLSV
DDTLDIIVAL QKRFPSIEGP RKDDICYATQ NRQDAVRNLS ADVDLLIVVG SKNSSNSNRL
RELALKTGTQ SYLVDTADDV ESSWFDNVTR VAVTAGASAP EVLVQQVVQA IATLAPSVVT
EVEGRKEDTV FAVPAELR
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