| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1056 |
|---|
| Symbol | rpsT |
|---|
| ID | 5081758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 1181636 |
|---|
| End bp | 1181902 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640498186 |
|---|
| Product | 30S ribosomal protein S20 |
|---|
| Protein accession | YP_001182583 |
|---|
| Protein GI | 146292159 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0268] Ribosomal protein S20 |
|---|
| TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.134446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTAATA GCAAGTCTGC AAAGAAGCGC GCGCTTCAAT CTGAAAAGCG TCGTCAGCAT
AACGCCAGCC GTCGCTCAAT GTTACGTACA TACGTTAAAA AAGTAATCGC TGCAATTAAA
GCAGGCGATC ACAAAACGGC AACAGAAGCT TTTGCTGTTG CACAACCAAT CGTTGACCGT
ATGGCGACTA AAGGTCTTAT TCACAAGAAT AAAGCCGCTC GTCAAAAGGC TCGTTTGAAC
GCTAAGATCA AAGCAATCGC TGCTTAA
|
|---|
| Protein sequence | MANSKSAKKR ALQSEKRRQH NASRRSMLRT YVKKVIAAIK AGDHKTATEA FAVAQPIVDR
MATKGLIHKN KAARQKARLN AKIKAIAA
|
|---|
| |