Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1053 |
Symbol | |
ID | 5081755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1178906 |
End bp | 1179679 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640498183 |
Product | hypothetical protein |
Protein accession | YP_001182580 |
Protein GI | 146292156 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGATAT TGGTTTCACC GGCTAAAACC CTCGATTTTG AGCAGCCCCC CTTAACTCAA GTCTATTCTC AGCCTGATTT TTTATACCAT AGCCAAGAGT TGATCCAAGT TTGTCGACAG TTAGCTCCGA GTGATATAGC AACACTAATG AAAGTCAGTG ATAAAATTGC AGGTTTAAAT GCTGCCCGTT TTGAAGGGTG GCAACCTCAA TTTACTTTAG AAAATGCCAA ACAAGCCATT TTTGCTTTTA GAGGCGATGT GTACACAGGC TTTGATGCCG ATACATTATC ATCACAAGAG CTAGAACGCG CTCAGTCACA GTTGCGTATT TTGTCGGGGT TGTATGGTTT ATTGCGCCCC TTGGATTTAA TCTTGCCTTA TCGTTTAGAA ATGGGGACTG CATTAAATAA TGCTAGAGGT AAGAATCTTT ATGATTTTTG GGGAGATATA TTAACGCTAG CCGTTAACAA AACGCTAACG GAACAGGGTG ATAGGATAGT CGTTAATTTA GCCTCTAATG AATATTTCAA AGCGATAAAA GTGAGACAGT TAGATGGGCA ATTAATCACA CCAGTATTTA AAGATTATAA AAATGGTCAA TATAAAGTGA TTAGCTTTTT TGCTAAGCGA GCTCGAGGCA TGATGGCGCG GTATATTATT AAACAGCAGA TAAACTCTAT CGATGAATTA ATAAAATTTG ATGCAGCAGG CTATTACTAC AGCGAAGAGC ATAGTACGCA GAGTGAGCCG ACTTTTTTAC GTGAAGCACA ATAG
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Protein sequence | MLILVSPAKT LDFEQPPLTQ VYSQPDFLYH SQELIQVCRQ LAPSDIATLM KVSDKIAGLN AARFEGWQPQ FTLENAKQAI FAFRGDVYTG FDADTLSSQE LERAQSQLRI LSGLYGLLRP LDLILPYRLE MGTALNNARG KNLYDFWGDI LTLAVNKTLT EQGDRIVVNL ASNEYFKAIK VRQLDGQLIT PVFKDYKNGQ YKVISFFAKR ARGMMARYII KQQINSIDEL IKFDAAGYYY SEEHSTQSEP TFLREAQ
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