Gene Sputcn32_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1053 
Symbol 
ID5081755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1178906 
End bp1179679 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content39% 
IMG OID640498183 
Producthypothetical protein 
Protein accessionYP_001182580 
Protein GI146292156 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATAT TGGTTTCACC GGCTAAAACC CTCGATTTTG AGCAGCCCCC CTTAACTCAA 
GTCTATTCTC AGCCTGATTT TTTATACCAT AGCCAAGAGT TGATCCAAGT TTGTCGACAG
TTAGCTCCGA GTGATATAGC AACACTAATG AAAGTCAGTG ATAAAATTGC AGGTTTAAAT
GCTGCCCGTT TTGAAGGGTG GCAACCTCAA TTTACTTTAG AAAATGCCAA ACAAGCCATT
TTTGCTTTTA GAGGCGATGT GTACACAGGC TTTGATGCCG ATACATTATC ATCACAAGAG
CTAGAACGCG CTCAGTCACA GTTGCGTATT TTGTCGGGGT TGTATGGTTT ATTGCGCCCC
TTGGATTTAA TCTTGCCTTA TCGTTTAGAA ATGGGGACTG CATTAAATAA TGCTAGAGGT
AAGAATCTTT ATGATTTTTG GGGAGATATA TTAACGCTAG CCGTTAACAA AACGCTAACG
GAACAGGGTG ATAGGATAGT CGTTAATTTA GCCTCTAATG AATATTTCAA AGCGATAAAA
GTGAGACAGT TAGATGGGCA ATTAATCACA CCAGTATTTA AAGATTATAA AAATGGTCAA
TATAAAGTGA TTAGCTTTTT TGCTAAGCGA GCTCGAGGCA TGATGGCGCG GTATATTATT
AAACAGCAGA TAAACTCTAT CGATGAATTA ATAAAATTTG ATGCAGCAGG CTATTACTAC
AGCGAAGAGC ATAGTACGCA GAGTGAGCCG ACTTTTTTAC GTGAAGCACA ATAG
 
Protein sequence
MLILVSPAKT LDFEQPPLTQ VYSQPDFLYH SQELIQVCRQ LAPSDIATLM KVSDKIAGLN 
AARFEGWQPQ FTLENAKQAI FAFRGDVYTG FDADTLSSQE LERAQSQLRI LSGLYGLLRP
LDLILPYRLE MGTALNNARG KNLYDFWGDI LTLAVNKTLT EQGDRIVVNL ASNEYFKAIK
VRQLDGQLIT PVFKDYKNGQ YKVISFFAKR ARGMMARYII KQQINSIDEL IKFDAAGYYY
SEEHSTQSEP TFLREAQ