| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1051 |
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| Symbol | |
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| ID | 5081753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1174537 |
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| End bp | 1176903 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640498181 |
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| Product | putative phosphoketolase |
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| Protein accession | YP_001182578 |
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| Protein GI | 146292154 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3957] Phosphoketolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.414026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACACA TCCATGAAAT AAACGCTCTG AAAAAGTACG TCAGAGCAAC AAACTTCCTT
GCCACATCAC AAATTTACCT CAAACAAAAT GTCTTACATA AACGTCCACT AGCACACTCT
GACATAAAAC CACGCTTACT CGGTCACTGG GGAACATGTC CTGGTATCAA CTTTGTTTAT
GCCAACATTA ACAGACTCAT CGTTAAACAT AATCGTCCAT TCATCTATTT AGTTGGCCCT
GGTCACGGTT TCCCAGCCGT ACAAGCTAAC CTATTCCTCG AAGGTTCCTT AAGCCACTTC
TACCCTGAAA CGATTCCGTA TAACGAAACT GGTATCGAAG ATATCTGTAA AAAGTTTTCA
GCAGCCTATG GCTATCCTTC ACACGCGAAC CCAGAAGCTC CAGGACAGAT CCTTGAGGGG
GGGGAATTAG GCTATTCACT TTCAGTAGGT TGGGGTGCCG TTCTCGATAA TCCTGACCTA
ATCGCCACTG TTTTGATTGG TGACGGTGAA TCAGAAACTG GCCCACTCGC CGCCTCATGG
TATGCAAACC GTTTAGTATC ACCGGCCACC AACGGGGCCG TGCTTCCAAT AGTGCATATT
AATGGTTATA AAATTTCTGG TCCAACTCGT ATGGGGCGCA TGAGCCATGA AGAGCTAGAT
CTTGAATTCC GAGGCTTAGG TTATTTCCCC ATCATTGTTG ACAGTGACGC AGAAGAAGAT
ATCTATGTGC AGATGACAAA TGCCATGGAT ACTGCTTACA GCATGATCAA CGAGATTCAA
ACCCGAGCTC GTAGTGGTGA AGATGTCGTC AAACCTCGCT GGCCAGTGAT CTTGATGCGG
ACAGCTAAAG GTTGGACAGG CGTGAGCGAA TACAATGGTG TCAAGCTAGA GGGCAATTGC
GAATCTCATC AAGTCATTGT GAATAAATGT GCGACTGACA AAGGCCACCT TGATGCACTC
AATAACTGGC TAGCCAGTTA TCATTTTCAA GAGCTTTATC ATATGAATGA TAAAGGTGAG
CTGATTTTTG ATGCCGATAT CTGCTCATTA ATCCCACCGA AACAACTTGC CTGTGGCCGC
CAACACTTAA CCTATGGTGG CGAAGTAGTT AGAGCTTTAT CTAATCCCGA TCTTGAAAAA
CTCTGCTACG GTCCAGAAGT TCCACGTGGT CAACGTGGTT TTTCAATGCT GAAAATGGGT
CAGTGGATGC GAGATGCATT TAAGCTTAAC CGTGATCAAA ATAATCTACG TATTTTTAGT
CCAGATGAAA CCTATTCAAA CCAATTACAA GCGGTATTTG AAGAAACAGA TCGCGCATGG
CAGTGGCCAA TCGAAAGCTG GGATGAAGAT ATATCCCGCG ATGGACGAGT GATTGAATTA
TTATCAGAGA ACTTGCTTTT CGGTATGTTG CATGGCTATA CAGTAACGGG ACGACATGGC
ATGTTCCCAA CTTATGAGTC CTTCTCGCAG GTCGTTTCAT CCATGGCAGA TCAATACTGT
AAGTATGTAT ATGCAAGCCA AGGTGTCCAC TTCCGTAAAC CACTACCAGC ATGTAACGTC
GTGCTATCTT CCCTCTTAGA GCGTCAAGAT CACAATGGCT ACTCACACCA AAACCCTTCA
TTTTTAGGGG CAATGTTAGA AAAACATCCA AAAATTATTT CGGCTTATTT ACCTGCTGAT
GCCAACAGTA CTCTCGTCTA TACAGAGCGC GCATTTGCCG ACCGTGACAA GCTCAATATC
CTTGTTGCAG GTAAAAAAGA ACTCCCTCAA TGGTTAAGCC TAGAAGAAGC CCGTAAGCAA
GCAAAAGACG GTGTTATGGT ATGGGATTTT GCTTCTGACG AGAATCCCGA TATTGTTCTT
GCAGGCTGCG GAGACTATGT CACTCAAGAA TGTATGGCAT CCTTGGTATT AATTCGGGAA
TTATTACCAA GAGCAAGAAT TCGCTTCGTT AGTGTAACGG AATTAAGCAG TGATGGCTTA
GGTAGCCGTA AGTTTAAAGA AAAGCCTTGG TTAATGGATG AAATATTTAC TCAAGATAAA
GGAGTAGTAT TTAACTATCA TGGTTATCCA AATACAATTA AAAAGTTAAT TTTTGATTAC
AAAGGAAGTC GCCGTTTTAG AATTAAAGGA TATGAAGAAG AAGGTTCAAC AACCACACCA
TTCGATATGG GCGTTCGTAA TGGAACATCA CGCTATCACC TTGTTATTGA TATGGCTTAT
AAGTTGTTCC AACAAGGCGT AATAGATGAA ACTCAGCATG TTTCAATTAC CACAGATATG
CTGCAGAGAC TTGTTGATCA TCGCAACTAT ATTAAAGCAA ATGGTGTTGA TCCAATCGAA
ATTGAAAACT GGGTTTGGAC ACGTTAA
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| Protein sequence | MTHIHEINAL KKYVRATNFL ATSQIYLKQN VLHKRPLAHS DIKPRLLGHW GTCPGINFVY
ANINRLIVKH NRPFIYLVGP GHGFPAVQAN LFLEGSLSHF YPETIPYNET GIEDICKKFS
AAYGYPSHAN PEAPGQILEG GELGYSLSVG WGAVLDNPDL IATVLIGDGE SETGPLAASW
YANRLVSPAT NGAVLPIVHI NGYKISGPTR MGRMSHEELD LEFRGLGYFP IIVDSDAEED
IYVQMTNAMD TAYSMINEIQ TRARSGEDVV KPRWPVILMR TAKGWTGVSE YNGVKLEGNC
ESHQVIVNKC ATDKGHLDAL NNWLASYHFQ ELYHMNDKGE LIFDADICSL IPPKQLACGR
QHLTYGGEVV RALSNPDLEK LCYGPEVPRG QRGFSMLKMG QWMRDAFKLN RDQNNLRIFS
PDETYSNQLQ AVFEETDRAW QWPIESWDED ISRDGRVIEL LSENLLFGML HGYTVTGRHG
MFPTYESFSQ VVSSMADQYC KYVYASQGVH FRKPLPACNV VLSSLLERQD HNGYSHQNPS
FLGAMLEKHP KIISAYLPAD ANSTLVYTER AFADRDKLNI LVAGKKELPQ WLSLEEARKQ
AKDGVMVWDF ASDENPDIVL AGCGDYVTQE CMASLVLIRE LLPRARIRFV SVTELSSDGL
GSRKFKEKPW LMDEIFTQDK GVVFNYHGYP NTIKKLIFDY KGSRRFRIKG YEEEGSTTTP
FDMGVRNGTS RYHLVIDMAY KLFQQGVIDE TQHVSITTDM LQRLVDHRNY IKANGVDPIE
IENWVWTR
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