Gene Sputcn32_1049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1049 
Symbol 
ID5081751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1171977 
End bp1172933 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content43% 
IMG OID640498179 
Producttransaldolase B 
Protein accessionYP_001182576 
Protein GI146292152 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00112286 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAATA CGTTAGAACA ACTCAAGTCA TATACTACTA TTGTTGCAGA TACCGGTGAT 
ATAGAAGCAA TTAAACGCTA TCAACCTGAG GATGCGACAA CAAATCCATC TCTCATCTTA
AAAGCAGCTC AAATCCCTGA ATATAGTTAT TTAATTGATA ATGCCATTGC TTGGGCACAG
ACACAGAGCA CTGAACTTGA GCAACAAATT GACGATGCGA GTGATAAGCT AGCGGTCAAT
ATTGGCGTTG AAATTCTGAA ACTCGTTCCA GGCCGAATCT CAACAGAGGT CGATGCCCGC
CTCTCATTCG ATAAAGAAAA ATCCATTGCT AAAGCCCATA AGCTAGTACG TTTGTATCAA
GAAGCTGGGA TTGATAAATC TCGCATTTTG ATCAAATTAG CGTCTACGTG GGAAGGCATT
TGTGCAGCCA AGGAATTAGA GCAAGAAGGG ATTAATTGCA ATCTCACATT ATTATTCAGT
TTTGCTCAGG CTCGAGCTTG CGCTGAAGCA GGCGTTTACC TGATTTCTCC TTTTGTTGGC
CGTATTCTAG ATTGGTACAA AAAAGACACA GGTAAGGATT ATGCACCAGC CAATGATCCA
GGTGTTGTTT CGGTTACTGA AATTTACAAC TACTACAAAC AGCACGGTTA TAACACAGTG
GTAATGGGAG CCAGTTTCCG CAATATAGGT GAAATCATTG AGTTAGCAGG CTGTGACCGC
TTAACTATTG GCCCTTCACT CCTAGAAGAG TTAGCCAATT CTCAAGCGCA AATTCAAGCT
AAACTCTTAC CGGCGACAAC GACGGTTGCA GCAGAGACGC CTCTGACTGA AGCGCAATTC
CGTTGGGACT TCAACCAAGA TCCAATGGCG GTTGAAAAGT TAGCGGAAGG TATACGTAAT
TTCGCCATCG ACCAGGGCAA ACTTGAAGTA ATGCTCAAGG CAAAACTCTC AAACTAA
 
Protein sequence
MANTLEQLKS YTTIVADTGD IEAIKRYQPE DATTNPSLIL KAAQIPEYSY LIDNAIAWAQ 
TQSTELEQQI DDASDKLAVN IGVEILKLVP GRISTEVDAR LSFDKEKSIA KAHKLVRLYQ
EAGIDKSRIL IKLASTWEGI CAAKELEQEG INCNLTLLFS FAQARACAEA GVYLISPFVG
RILDWYKKDT GKDYAPANDP GVVSVTEIYN YYKQHGYNTV VMGASFRNIG EIIELAGCDR
LTIGPSLLEE LANSQAQIQA KLLPATTTVA AETPLTEAQF RWDFNQDPMA VEKLAEGIRN
FAIDQGKLEV MLKAKLSN