Gene Sputcn32_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1046 
Symbol 
ID5081748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1169287 
End bp1169823 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content39% 
IMG OID640498176 
Producthemerythrin HHE cation binding domain-containing protein 
Protein accessionYP_001182573 
Protein GI146292149 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.012593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAAA GACTTATGCA TGATCATAAA CATATCGCAG TTTTATTAAA TGTTTTAAAA 
AACAAACAGA TGAAACTATC TGAGGGTGAA GCGATTAATT TTATCGTGGT AAGAGACATC
GTCGAGTATA TGCAAGAGTA TGCCGAGCGC AGCCATCATC CTATTGAAGA CATTATTTAT
GCTTACTATT TAGCACATAA GGCCAATGAC GATATTAATA AACTGAGCAG TGAGCATGAA
ACGGTGATCC AAGCTTCTGC GACGTTGATG AATACTTTAA ATTTGATTTT GAGTGATATC
GTTGTTGCGA GAGAAAAGTT AATTACAGAT TTTGCTGAGT ATGTTGAATT ACAGGAGCGG
CATATGCAAA TGGAAGAGAG AGAGATATTT CCGCTCCTCG CTCAAAACCT AACGGAAGAG
GACTGGTTAG TGATTGAAGA GGAATGCCAA CAATCCCTTA TTGATGACCC ACTGTTTTTG
GACCGAGAGC AACAGGCATT TGATGAGCTA CGATCTTATC TTTCCGAGTC TGAATAG
 
Protein sequence
MLKRLMHDHK HIAVLLNVLK NKQMKLSEGE AINFIVVRDI VEYMQEYAER SHHPIEDIIY 
AYYLAHKAND DINKLSSEHE TVIQASATLM NTLNLILSDI VVAREKLITD FAEYVELQER
HMQMEEREIF PLLAQNLTEE DWLVIEEECQ QSLIDDPLFL DREQQAFDEL RSYLSESE