Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1046 |
Symbol | |
ID | 5081748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1169287 |
End bp | 1169823 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640498176 |
Product | hemerythrin HHE cation binding domain-containing protein |
Protein accession | YP_001182573 |
Protein GI | 146292149 |
COG category | [S] Function unknown |
COG ID | [COG3945] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.012593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAAAA GACTTATGCA TGATCATAAA CATATCGCAG TTTTATTAAA TGTTTTAAAA AACAAACAGA TGAAACTATC TGAGGGTGAA GCGATTAATT TTATCGTGGT AAGAGACATC GTCGAGTATA TGCAAGAGTA TGCCGAGCGC AGCCATCATC CTATTGAAGA CATTATTTAT GCTTACTATT TAGCACATAA GGCCAATGAC GATATTAATA AACTGAGCAG TGAGCATGAA ACGGTGATCC AAGCTTCTGC GACGTTGATG AATACTTTAA ATTTGATTTT GAGTGATATC GTTGTTGCGA GAGAAAAGTT AATTACAGAT TTTGCTGAGT ATGTTGAATT ACAGGAGCGG CATATGCAAA TGGAAGAGAG AGAGATATTT CCGCTCCTCG CTCAAAACCT AACGGAAGAG GACTGGTTAG TGATTGAAGA GGAATGCCAA CAATCCCTTA TTGATGACCC ACTGTTTTTG GACCGAGAGC AACAGGCATT TGATGAGCTA CGATCTTATC TTTCCGAGTC TGAATAG
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Protein sequence | MLKRLMHDHK HIAVLLNVLK NKQMKLSEGE AINFIVVRDI VEYMQEYAER SHHPIEDIIY AYYLAHKAND DINKLSSEHE TVIQASATLM NTLNLILSDI VVAREKLITD FAEYVELQER HMQMEEREIF PLLAQNLTEE DWLVIEEECQ QSLIDDPLFL DREQQAFDEL RSYLSESE
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