| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1044 |
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| Symbol | |
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| ID | 5081746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1167712 |
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| End bp | 1168317 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640498174 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001182571 |
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| Protein GI | 146292147 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0139915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCACTAG CGATACCGCA AATACATGCC CATGAGCATA GCGATGAACA ACTGATGCAA
CGCTATGCAC AAGGAGATAG TCAGGCATTT GAGCAGTTAT ACCTGAAGCA CAAGGGGGCA
CTTTATCGTT ATTTTGTGCG CCAGTTGGGT GATAAGCAAC TGGCTGAGGA TTTATACCAA
GAAACGTGGG GGCGGGTTAT CCGTGCCGCA GTAAATTATC AAGTTAGTGC TAAATTCAGT
ACTTGGCTTT ACCGCATTGC ACATAACTTA TTGATTGACC ATGTCCGAGC TGTCAAGCCT
GTCGATTTCA TCGCAAGTGA TACCGATGTG ACTGGCTTAG ATACTTTTGA GGGATGCGAT
CAAGATAAAC CTGATATCCA CTGGCAAGAA GCCCAAAAGA GTTTGCTACT TAAAACCTGT
ATTTCACTAT TGCCCCAAGT ACAGAAAGAA GCCTTTATTC TTAATATTGA AATGGGATTT
ACTGCTGCAA TGATAAGCGA TATCGCAGGG GTAACCCTCG AAGCAACAAA AAGTCGAATT
CGCTATGCCT ATCAAAGCTT AAAAGAGTGC GTAAATGCGA AATGGCAGGA GGCGGGCCAT
GAATAA
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| Protein sequence | MALAIPQIHA HEHSDEQLMQ RYAQGDSQAF EQLYLKHKGA LYRYFVRQLG DKQLAEDLYQ
ETWGRVIRAA VNYQVSAKFS TWLYRIAHNL LIDHVRAVKP VDFIASDTDV TGLDTFEGCD
QDKPDIHWQE AQKSLLLKTC ISLLPQVQKE AFILNIEMGF TAAMISDIAG VTLEATKSRI
RYAYQSLKEC VNAKWQEAGH E
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