| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1042 |
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| Symbol | |
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| ID | 5081744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1163764 |
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| End bp | 1165521 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498172 |
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| Product | putative sulfate transporter YchM |
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| Protein accession | YP_001182569 |
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| Protein GI | 146292145 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCACACT CTGCCCATTT GTTTTCATTA AGAATTGCTC ACGCTCTCAC TGAAGCCTGT
GTAAAAGATA AATACTCCCT AAAACGATTT GGGCAAGACC TACTTGCTGG TTTAACCGTG
GGAATTATCG CCATTCCTTT GGCAATGGCC CTCGCGATTG CTAGCGGTGT CGCGCCACAA
TACGGTTTAT ATACTGCGAT TATCGGTGGC TTTATCATTG CGATGTCAGG TGGTTCACGC
TACAGCGTAT CTGGGCCTAC CGCGGCCTTT GTCGTGTTGC TTTATCCAAT AGCACAACAA
TTTGGCTTAG CCGGATTATT GGTCGCTACC GTGATGTCAG GCATGATATT AGTCGCCATG
GCGATGCTGC GTCTTGGGCG CTTAATCTTA TATATCCCAG AATCAGTGAC CTTAGGTTTT
ACAGCAGGGA TTGGTGTTGT TATTGCCACG TTACAACTCA AGGATTTTTT TGGCTTACCT
ATAGAGCACA TGCCGGAGCA ATATTTTTCA AAACTTATTA CTCTTGGCCA AGCACTTCCT
ACAATGCACT TACCTAGCTT CTTGGTCGCA ACGATCACCT TAGCGACTAT GCTGCTTTGG
CCCAAACTAA AAATTCCAGT ACCTGCACAT CTGCCCGCTA TTGCTCTTGG CAGCATCATC
GCCTTAGCAC TCAATGCGAT GGGAGCGGAT ATAGAAACCA TTGGTACACG TTTCCACTAC
CAATTAACCG ATGGTACTAC AGGGATGGGG ATCCCACCCG TACTACCCAG TTTTGAATGG
CCTTGGTTAC AAGCCGGAGC CAATGGACAA CCCTTTGAGT TTAATCTCAC GACCTTTCAA
GCACTATTAC CCGCAGCCTT TGCAATAGCC ATGTTAGGCG CCATTGAATC CTTACTCTGC
GCCGTGGTGC TCGACGGTAT GACCGGAAAA CGTCACAGTG CTAACAGCGA ATTACTCGGT
CAAGGGATAG GTAATATTAT CACGCCCTTT TTTGGCGGGA TCCCTGCCAC AGCGGCGATT
GCCCGCAGTG CTGCAAACGT TAAAGCCGGG GCTCAGAGCC CGATTGCATC GATGATCCAC
GCGATAGTGG TGTTAATTGG TTTAGTTGCC CTAGCTGGAG TGTTAGCCTA TTTACCTATG
TCTGCTATGG CAGCATTGTT ACTGGTCGTC GCTTGGAATA TGAGCGAAGC TCCTAAAGCG
ATGCATTTAA TCAAAACCGC GCCCACCAGC GATATCTTAG TCTTTATAAG CTGTTTTTCA
TTGACGGTTA TTTTCGATAT GGTTATCGCC ATTAGTGTGG GGATTATTCT TGCAGCTCTG
CTATTTATGA AAGAAATTGC GGAAATGACA AGACTCTATG ATATCAGTAG CAATAAACGC
TATGTCGATC AGCCTCTGCC CGCAGATTGG ACAGTGCTCA AAATTAATGG ACCATTATTC
TTTGCGGCGG CAGATCGTAT TTTTGCCGAA ATAGCCAGTT TAGCCCAAGA TAAACGAGTG
ATTGTATTGT ATCTCGATGG GGTATCAATA CTGGATGCTG GAGGCTTAGC AGCGTTGACA
AAACTGATTG AAAAATGCAA GAAAAGTAAT ACCAAACTCA TTGTTGCCGA TCTGCAATTT
CAGCCCATCC GCACACTCGC AAAAGCAAAA GTGCAACCCA TTGAAGGAGT GCTTAAGTTT
TACCCAACCC TGCGTGAAGC CTTAGCAGAA GCCCCATTGG TTTCTGAACA AACTGAACCA
GTAGCAGACA ATCTTTAA
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| Protein sequence | MSHSAHLFSL RIAHALTEAC VKDKYSLKRF GQDLLAGLTV GIIAIPLAMA LAIASGVAPQ
YGLYTAIIGG FIIAMSGGSR YSVSGPTAAF VVLLYPIAQQ FGLAGLLVAT VMSGMILVAM
AMLRLGRLIL YIPESVTLGF TAGIGVVIAT LQLKDFFGLP IEHMPEQYFS KLITLGQALP
TMHLPSFLVA TITLATMLLW PKLKIPVPAH LPAIALGSII ALALNAMGAD IETIGTRFHY
QLTDGTTGMG IPPVLPSFEW PWLQAGANGQ PFEFNLTTFQ ALLPAAFAIA MLGAIESLLC
AVVLDGMTGK RHSANSELLG QGIGNIITPF FGGIPATAAI ARSAANVKAG AQSPIASMIH
AIVVLIGLVA LAGVLAYLPM SAMAALLLVV AWNMSEAPKA MHLIKTAPTS DILVFISCFS
LTVIFDMVIA ISVGIILAAL LFMKEIAEMT RLYDISSNKR YVDQPLPADW TVLKINGPLF
FAAADRIFAE IASLAQDKRV IVLYLDGVSI LDAGGLAALT KLIEKCKKSN TKLIVADLQF
QPIRTLAKAK VQPIEGVLKF YPTLREALAE APLVSEQTEP VADNL
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