Gene Sputcn32_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1040 
Symbol 
ID5081742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp1161896 
End bp1162993 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content47% 
IMG OID640498170 
Productphosphoribosylaminoimidazole carboxylase ATPase subunit 
Protein accessionYP_001182567 
Protein GI146292143 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 
TIGRFAM ID[TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGA CAAACATAAA ACCTAAGGTT TGGGTATTAG GTAATGGCCA GTTAGGCGCA 
ATGTTAACCC ACGCAGGCGA GCCATTAGCA ATCGATGTTC ACGCTGTAGA TATTATGGCG 
CCAACAGACG AAATACTGCC ATTATCCCCC CACGATATCA TTACGGCTGA GCGTGAACAG 
TGGCCGGAAT CTGCCTTGAG TTTACAACTC AGTTCCCACC CCCATTTTGT TAACGGCCCC 
GTTTTCAGCC GCTTAGCTGA CCGTTACAGT CAAAAATGCT TACTTGATCA ATTAAGCGTC 
CCCACTGCGC CTTGGGCACT GGTCGATGAT GCAACACAGG TCGATGAGCT TTACCAGCGT 
TTTGGCCCCC GCGTGCTGAT GAAGCGTCGT ACTGGCGGGT ATGATGGCAA GGGCCAACAT 
TGGCTCAAAC AAGCCGAAGC GAGTGATATA CCAAATGATT GGCGTAACCT TGCAATTGCT 
GAACAAGCGA TTAATTTTGA TGAAGAAGTG TCATTAGTAG GTGTTCGTAC CCGTGAAGGT 
CAATGTGTGT TTTATCCACT GACGCTTAAT CTTCATCAAG ATGGCATATT AATGGCGTCA 
ATTTCGCCGC TAGCGCGTTT AAACCACTTG CAAGTACAAG CGCAAACTAT GCTAAGTGCC 
ATTATGCACG AGCTAGAATA CGTTGGTGTG ATGGCGATGG AATGCTTCCG TGTTGGCAAT 
AATTTGCTTG TTAATGAGTT AGCACCACGT GTACATAACT CAGGACATTG GACGCAAGCG 
AGTACACATA TGGATCAATT CCAGTTGCAC CTAAGGGCAC TGTGCGGCAT CGCAATACCT 
GAACCACAGG TGAACTTTCA ATGTGTTATG GTCAATCTTA TTGGTATCGA TAATGACCCA 
CGTTGGTTAA GCCTGCCTAA TGCTGAACTT TATTGGTACA ACAAAGAAGT GCGCCAAGGT 
CGTAAAGTTG GCCATTTAAA CCTTTCGGTA CCTAATCAAA CTGTGCTCAA CACGAGTATC 
ACCGCCCTAC AAACTTGGAT GCCAACCCAA TACCAAGCCC CCCTTGCGTG GATATTGGCC 
GAGTTTGCCA ATACATAA
 
Protein sequence
MTQTNIKPKV WVLGNGQLGA MLTHAGEPLA IDVHAVDIMA PTDEILPLSP HDIITAEREQ 
WPESALSLQL SSHPHFVNGP VFSRLADRYS QKCLLDQLSV PTAPWALVDD ATQVDELYQR 
FGPRVLMKRR TGGYDGKGQH WLKQAEASDI PNDWRNLAIA EQAINFDEEV SLVGVRTREG 
QCVFYPLTLN LHQDGILMAS ISPLARLNHL QVQAQTMLSA IMHELEYVGV MAMECFRVGN 
NLLVNELAPR VHNSGHWTQA STHMDQFQLH LRALCGIAIP EPQVNFQCVM VNLIGIDNDP 
RWLSLPNAEL YWYNKEVRQG RKVGHLNLSV PNQTVLNTSI TALQTWMPTQ YQAPLAWILA 
EFANT