Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1023 |
Symbol | |
ID | 5081722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1136320 |
End bp | 1137054 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640498151 |
Product | hypothetical protein |
Protein accession | YP_001182551 |
Protein GI | 146292127 |
COG category | [S] Function unknown |
COG ID | [COG1496] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000164344 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAATC ACGATTGGCC TGTTCCTGCT AATGTTGGCA TCGCTATGAC AAATCGTCAT GGCGGTGTGA GCGTACATCC CTATGATAGT CTCAATCTTG GGCTGCATGT CGGTGATGTT GAAGAGCGGG TGATGGCTAA TCGTGACTTA CTCTGCAAAC AATTAGCGTT AACCGCCGAG CCTGTCTGGC TCGAGCAAGT GCATGGTACT CATGTGCTTA ATTTAGACGC GCTGAGCTTA GCTCATGCTG CGGATACACC GATTGCCGAT GCCAGTTACA GCCGAACCGC TGGACGAGTT TGCGCTGTGA TGACCGCCGA TTGTTTGCCT GTGTTGCTGT GTAATCAAGC GGGAACCGAA GTGGCTGCGG CTCATGCTGG TTGGCGTGGT TTGTGTGATG GCGTGATTGA GGCAACTGCG GCGCAGTTTA GTTCACCTAT GGATGAGTTG ATTGCCTACC TCGGCCCGGC TATTGGTCCA CAAAAATTTG AAGTCGGCGT TGAAGTACAG CAAGCCTTTT GTACTTTACA TCTACAGTCG GCAGCGTGTT TTATTCCAAG TGGTAACAAG TATCTTGCCG ATATTATTGG CTTGGCTAAA TTACGCTTGA GTTTACTCGG GATAAACCCT ATTTATAGCG CAGATATCTG CACAGTCAGC GACACGGATT ACTTCTCTTA TCGTCGCGAT AAGGTGACGG GACGCATGGC TTCATTGATC TGGCTTAAGT CTTAA
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Protein sequence | MFNHDWPVPA NVGIAMTNRH GGVSVHPYDS LNLGLHVGDV EERVMANRDL LCKQLALTAE PVWLEQVHGT HVLNLDALSL AHAADTPIAD ASYSRTAGRV CAVMTADCLP VLLCNQAGTE VAAAHAGWRG LCDGVIEATA AQFSSPMDEL IAYLGPAIGP QKFEVGVEVQ QAFCTLHLQS AACFIPSGNK YLADIIGLAK LRLSLLGINP IYSADICTVS DTDYFSYRRD KVTGRMASLI WLKS
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