| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1019 |
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| Symbol | |
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| ID | 5081715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1131352 |
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| End bp | 1132062 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640498144 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001182547 |
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| Protein GI | 146292123 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCTA AACGTGGTCG ACTCGATAGA TATTTAAGCG CGAAGATGCA GATGCCCCGC
AAATTAGTGC GTGATTTACT GCTATCTGGG CGTGTGCAAG TGGATGGGCA GATTGTTAAA
GAGATGGACA GACAAGTGGA TGAGTTTTCC CATATCCAAC TCGATGATCA AGTTTTACAG
GCCAATACTC CGGTTTATAT GATGTTACAT AAGCCTGTTG GCGTGGTGAG TGCGACTAAG
GATAACCAAC ATAAGACGGT AATCGACCTA CTTGATAATG AATATCGGCA CGAATTGCAT
ATCGCGGGTC GACTGGATTT AAATTCTTCT GGATTATTGC TCCTGACTAA CGATAGTCGA
TGGTCCGAGG CGCTTATGTC ACCAACAGAA AAAGTCGATA AAGTGTATCG TGTGACGCTT
GCAAATCCAC TAACACATGA TTATGTAACA GCATTTGCTG AAGGTATGTA TTTTGGTTTT
GAAGATATCA CGACTCAACC CGCAAAACTG GTTATCCTCG ATTCCCATTT GGCTGAAGTG
ACGTTAAAAG AAGGTAAATA CCATCAAATA AAGCGTATGT TTGGCCGATT TCGTAATCCT
GTGATTGGTC TACATCGGTT ATCCATTGGT GACATAGTGT TAGATGAACA GCTTCAACCT
GGTGAGAGTC GAACTCTCAC CGCGGCTGAG ATTGCTTGCA TAAAAATCTA A
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| Protein sequence | MQSKRGRLDR YLSAKMQMPR KLVRDLLLSG RVQVDGQIVK EMDRQVDEFS HIQLDDQVLQ
ANTPVYMMLH KPVGVVSATK DNQHKTVIDL LDNEYRHELH IAGRLDLNSS GLLLLTNDSR
WSEALMSPTE KVDKVYRVTL ANPLTHDYVT AFAEGMYFGF EDITTQPAKL VILDSHLAEV
TLKEGKYHQI KRMFGRFRNP VIGLHRLSIG DIVLDEQLQP GESRTLTAAE IACIKI
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