Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0997 |
Symbol | |
ID | 5081763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1108766 |
End bp | 1109719 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640498122 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
Protein accession | YP_001182525 |
Protein GI | 146292101 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.457047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAG TCGTACTTGA TGGTGAAACC CTTAATCCTG GCGACTTGAG CTGGCATGCC TTAAGTGAAT TAGGTGAGTT GACATGTTTT CCTCGTACAG CGAGACAAGA TATAGTCGCA AGGGCTAAAG ATGCCGAGGT GGTGTTGACG AATAAAACCC CGCTCAATGC CGATATTCTT GCGCAGCTTC CTGCGCTTAA ATATATCGGA GTGTTGGCAA CGGGCACAAA TGTAGTGGAT TTAGCCGCTG CAAAGGCGCA AGGCATAGTG GTGACTAACG TGCCAGCCTA TGGGCCTGAT GCAGTAGCCC AAATGGTTTT TGCCCATATA TTGCACCATA CCCAAGCGGT TGCGGCTCAT CATCAAGCTG TGGTCGATGG TCAGTGGGCA AATTGTCAGG ATTTTTGCTT TACCTTAATG CCGCTGCAAT CCTTAAAGGG TAAAACCTTA GGCTTAATAG GTTACGGGGA TATAGGTCAG CAGGTTGGGG AAATAGCCCT TGCGTTTGGT ATGAAAGTGC TCGTGCATAC CCGAACTGTA CGTGAGGATT TACCTTTAGG AGTCATGTGG GCAGAACGTG ATACCGTCCT TAGTGAGTCT GATATTGTTT CGCTCCATTG TCCGCTCACG CCGCAAACTG AGCAATTTAT CAATCAGCAA ACTCTTGCCT TGATGAAACC TAAAGCACTG CTGATTAATA CAGCGCGCGG CGGATTAATT GATGAGCCTG CACTGGCTAA TGCACTGATG CAAGGCAAGT TATTTGCCGG TGTCGATGTG CTATCGACTG AGCCACCGAG CGCAGATAAT CCCTTATTGC ATGCACCGAA TATCAGCATC AGTCCGCATA ATGCGTGGGC AACAAAAGAA GCGCGGCAAA ACCTACTCAA TATTGCCGTG GCGAATGTGA ACGGTTTTTT AAAGGGTGAA GTGATTAACT GTGTAAACAG GTAA
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Protein sequence | MKIVVLDGET LNPGDLSWHA LSELGELTCF PRTARQDIVA RAKDAEVVLT NKTPLNADIL AQLPALKYIG VLATGTNVVD LAAAKAQGIV VTNVPAYGPD AVAQMVFAHI LHHTQAVAAH HQAVVDGQWA NCQDFCFTLM PLQSLKGKTL GLIGYGDIGQ QVGEIALAFG MKVLVHTRTV REDLPLGVMW AERDTVLSES DIVSLHCPLT PQTEQFINQQ TLALMKPKAL LINTARGGLI DEPALANALM QGKLFAGVDV LSTEPPSADN PLLHAPNISI SPHNAWATKE ARQNLLNIAV ANVNGFLKGE VINCVNR
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