| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0994 |
|---|
| Symbol | |
|---|
| ID | 5081760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1106529 |
|---|
| End bp | 1107206 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640498119 |
|---|
| Product | nucleotidyl transferase |
|---|
| Protein accession | YP_001182522 |
|---|
| Protein GI | 146292098 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.65594 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCA TGATCCTAGC GGCAGGAAGG GGCGAGCGCT TAAGACCATT AACTGACACT
GTACCTAAAC CATTAGTGCC AGTATTAGGT AAGCCTCTCA TTGTTTATCA CATTGAAAAA
TTGGTCGCGT TGGGGATTAC CGATATAGTG ATTAATCATG CTTGGCTCGG GCATAAATTA
GTTGAAGCGC TGGGGGATGG GAGTGCCCTT GGCGCCAATA TCCGTTATAG CGCGGAAGAT
AATGCACTTG AAACGGGAGG CGGTATTAAA CGCGCTTTAC CTTTTTTGTG CGAAGACGGA
AGTGATGCGC CCTTTTTAGT GATCAACGGT GATGTATTTA TCGATGCTTT ACCGCCTTTA
CCAGTGCTTG AGAACGATAT TTTTGCTCAC CTATGGCTAG TCCCCAATCC TGAGCAGCAC
CCCCAAGGTG ATTTTGTTTT AAGTGGGAAT AGGGTCAGTG AACAAGGGAG CACAAAGTTC
ACTTTTTCTG GCCTAGGTAT TTATCGTCCT AGCTTATTTA ATGGGACCCC AGAAGGGGCC
TTTGCTTTAG GACCGTTATT GCGATCACAT ATGGCCCAAG GCCGAGTGAG TGGTGCTATG
TTCGAAGGAT TTTGGTGTGA TGTAGGCACT GTGCCGCGTT TACAAGCCCT CGAGTTAACC
TTGCTGGATA GCAAGTAA
|
|---|
| Protein sequence | MKAMILAAGR GERLRPLTDT VPKPLVPVLG KPLIVYHIEK LVALGITDIV INHAWLGHKL
VEALGDGSAL GANIRYSAED NALETGGGIK RALPFLCEDG SDAPFLVING DVFIDALPPL
PVLENDIFAH LWLVPNPEQH PQGDFVLSGN RVSEQGSTKF TFSGLGIYRP SLFNGTPEGA
FALGPLLRSH MAQGRVSGAM FEGFWCDVGT VPRLQALELT LLDSK
|
|---|
| |