| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0990 |
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| Symbol | pdxA |
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| ID | 5081803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1100494 |
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| End bp | 1101480 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640498115 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001182518 |
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| Protein GI | 146292094 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0127829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCACTA AACGCATTGC CGTTACCCCA GGAGAACCTG CAGGTATCGG CCCCGATTTA
GTCGTACAAC TCGCTCAACA GGCTTGGCCT GTTGAGTTAG TCGTTTGTGC CGACCCAGAA
TTACTCGCTA GCCGTGCAAA GCTGCTCGGT CTAACGGTCT CTTTTCGACC GTATCTACCA
GATCAGGCTC CCCAACCTCA AGAAGCAGGC ACATTAACCA TAGCCCCATT CAAATTGGTG
AGTGCTGCGG TATGTGGCAA ACTTGATGAA CAGAATAGTC CTTATGTAGT CGAAACCTTG
CGCTATGCGG GCGAAAGAAA CATGAGCGGT GAATTCGATG CCGTCGTCAC AGGCCCTGTA
CACAAAGGGA TTATCAACCA AGCGGGTATT TCCTTTAGCG GACATACGGA ATTTTTTGCC
CATCAAGCCA ACTGCCCAGA TGTCGTGATG ATGCTAGCAA CACCCGGGTT ACAGGTGGCG
CTCGTCACCA CCCACATCCC ACTTGCCTAT GTAGCAAAAG CCATTACTCG CCAACGGTTA
CAACATATTA TCAAGATTTT ACATGCTGAC CTTATCAGTA AATTTGGTAT TGTTTCACCG
AAAATTTATG TGTGCGGTTT AAACCCACAT GCAGGTGAAG ATGGACATTT AGGACGGGAA
GAAATTGATG TGATCATTCC TGCACTTAAC GAGTTGCGCG AAGAATATCA GATGAATATT
GTCGGTCCAT TACCAGCGGA CACACTGTTC CAACCCAAAT ATTTACAGGA CGCAGATGTC
GTCTTGGCCA TGTACCATGA CCAAGGGCTT CCCGTTCTCA AGTCACAAGG ATTTGGCAAA
TCGGTAAACA TTACGTTAGG TTTACCCTAT ATCCGTACCT CGGTTGACCA TGGTACAGCG
CTCGATCTCG CGGGCACAGG CAAGGCCGAT ATCGGCAGTT TTGTCTGCGC TCTGAATAAA
GCCATTGAGT TATCCTCAAA AAACTAA
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| Protein sequence | MTTKRIAVTP GEPAGIGPDL VVQLAQQAWP VELVVCADPE LLASRAKLLG LTVSFRPYLP
DQAPQPQEAG TLTIAPFKLV SAAVCGKLDE QNSPYVVETL RYAGERNMSG EFDAVVTGPV
HKGIINQAGI SFSGHTEFFA HQANCPDVVM MLATPGLQVA LVTTHIPLAY VAKAITRQRL
QHIIKILHAD LISKFGIVSP KIYVCGLNPH AGEDGHLGRE EIDVIIPALN ELREEYQMNI
VGPLPADTLF QPKYLQDADV VLAMYHDQGL PVLKSQGFGK SVNITLGLPY IRTSVDHGTA
LDLAGTGKAD IGSFVCALNK AIELSSKN
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