Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0983 |
Symbol | |
ID | 5081796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1094475 |
End bp | 1094948 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640498108 |
Product | hypothetical protein |
Protein accession | YP_001182511 |
Protein GI | 146292087 |
COG category | [S] Function unknown |
COG ID | [COG3610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.348363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAAC TACTGAACAT GCTTTTACAT GATGCATTTT TTTCAGCTAT TCCTGCCGTT GGTTTTGCCA TGGTGTTTAA TGTGCCCAAG CGTTTTTTAC CTTACTGCGC TTTAGCTGGC GCGATAGGAC ATAGCTCGCG TACCTTGATG CTTCACTTTG GCCTTCCTAT CGAATGGGCG ACATTTGCTG CTGCAGCTTT AGTGGGGATG ATAACAATAG GGTTTGCGAA GCGCCATTTA GCGCCACCTT TAATGTATGC TGTGGCCGCT ATTATTCCGA TGATACCCGG TACTTACGCA TTTAATACTG TGATTGCTTT AGTGCAGTTA ACTGCTCAGT CTCAGGTGAG CCAAGAGTTA ACCGGCCAAG TGATCAGCAA TGGTTTAAAA ACCGTCTTTA TTCTTGGAGC ATTAGCGGTT GGGCTTGCAT TGCCGAGTCT ATTGTATTTT AGAACCCGCC CCGTTATTCG GTAA
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Protein sequence | MIELLNMLLH DAFFSAIPAV GFAMVFNVPK RFLPYCALAG AIGHSSRTLM LHFGLPIEWA TFAAAALVGM ITIGFAKRHL APPLMYAVAA IIPMIPGTYA FNTVIALVQL TAQSQVSQEL TGQVISNGLK TVFILGALAV GLALPSLLYF RTRPVIR
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